Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1935 ATGGGCGCGAGTCGGAAGCTTCAGGGAGAGATCGATCGAGTTCTCAAGAAGGTCCAGGAAGGTGTTGAAGTCTTCGATAGTATCTGGAACAAGGTTTACGACACGGACAATGCTAACCAGAAGGAGAAGTTTGAAGCAGACCTCAAGAAGGAGATTAAGAAGCTCCAGAGGTACCGGGATCAAATTAAGACTTGGATTCAGTCCAGCGAGATCAAAGACAAGAAGGTTAGTGCCTCTTATGAGCAGGCTCTGGTGGATGCGCGCAAGCTGATTGAGCGAGAAATGGAAAGGTTTAAGATTTGTGAGAAGGAGACTAAGACCAAAGCATTCTCAAAAGAAGGCTTGGGTCAACAGCCTAAGACTGATCCAAAAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGAGAGTTAGAGTCTCAGATTGATAATTTTGAAGCTGAGCTTGAAGGGCTTTCTGTCAAGAAAGGAAAGAACAGGCCACCCAGATTGACACATCTAGAGACATCAATTACTCGGCACAAGGCTCATATAAAGAAATGTGAATTTATCTTGAGACTACTAGATAATGATGAATTAAGTCCCGAGCAGGTTAATGATGTCAAAGATTTCTTGGACGACTATGTAGAACGAAATCAGGAGGACTTTGATGAATTCAGTGATGTCGATGAGCTATACAGTTCATTACCTTTAGATAAAGTGGAGACTTTGGAAGATCTTGTTGCAATTCCCCCTGGTCTTGCTAAGGTGACTCCTGGTCTTAGCTTGAAGAATTCATTGGCAACAACGGCGTCACAATCAGCATCAGCAACTGCCTCGCAGACATCTGAGCAAGCTGATGAAACAGCGTCCCAGGATAGCAATTCTGACATTGGTGTTAGAACTCCGCCCGCTAAAAGTAGTGGAATTAGTTCTGCTACTTCAACGCCAGCTGGGAACCATGCTGCTCCTGTTTCTGTGAATGTTTCAGCTCATAACTTGTCCAGTGCACCAGCTGCTGCATCAGTCCTAGCTGGATCAAATTCTGTTCGGAGTCCCTCAGAGAATACTAATGCTGGCAATTCAACTTCTGTAAATCAATCTCCCTCTCTAAAGGAAGATGAGATTAATAGCTTTCCTGGCCGGAGACCATCTCCATCACTTTCTGATGCACCACTGAGGAGCATTGGCCGAAACAACTTGTCAAATCAAGCAACAACTAGCATCCCTCTTGGTGCTGGAAACATGGTTTCCAACAATGGAGCCCTTGGTTCAGTCCCTTCAGCCTCTGAAATAACTAAGAGAAACATGTTGGCAGCTGATGATAGACTTGGGAGTAGTGGGATGGTGCAGCCTCTTGTATCCCCCCTAAGTAATAATAGAATGATCTTGCCTCAGGTTGCGAAGGCTAATGATGGTACTGCCTCAGTTGACTCTAATACTGCTAATGAAGCTGCAGCTGTATCTAGTAGAGTTTTCTCCCCATCTGTGGTTCCTGGCATGCAATGGAGACCTGGAAGCCCTTTCCAGAATCAAAGTGATGTGGGGCAGCTTCGTGGAAGAGCTGAAATAGCTCCAGATCAAAGGGAAAAATTTCTGCAGAAGTATCAGCAAGTGCAGCAGCAAGGGCACAGTACCCTGCTTAATATGCCATCCCTTGGAGGAAATCACAAGCAGTTTTCTGCCCAGCAACAAAATCCCCTTTTACAGCAGTTTAACTCTCAGGGTTCCTCTGTTTCTTCTCAATCTGGCATCGGACTTGGAGTCCAGTCACCAGGTCTCAGTGGTATTTCTTCTACCTCGCTACAGCAGCCACCAAATTCTGTCCATTCCCCATCTAGTCAACAGCCGTTGATGTCAGGTCTTTCCAGAGATGCAGATGTAGGCAATTCTAAAGTTGAAGAACAGCAGCATCAGAATTATCCTGATGAGTCAGCTACTGAGTCTACTGCTAGTACTGGGATTGGCAAGAATCTCATAAACGAAGATGATTTGAAATCAGCTTATGCTGTAGATTCTCCTGCAGGAGCTTCTGCCTCTCTTGGAGAGCCTGGTCAAACTTCCAGAGATATTGATTTGTCTCCTGGCCAACCTTTACAATCCAATCAACCTACTAGTAACCTTGGTGTCATTGGTAGAAGAAATGGTGCTGATCTTGGAGCCATTGGTGATAATTTTACTGGATCAAGTTCAAATGTTAATTCTAGTGGTGTGCGTGATCAATTATATAATTTGCAAATGCTTGAGGCGGCCCACTACAAACTTCCCCTACCTAGAGACTCGGAACGTCCTAGGCCTTATACTCCTAGGCACCCAGCAATAACACCTCCTAGTTATCCTCAAGTACAGGCACCTATTGTTAATAATCCTACCTTTTGGGAGAGAGTAGGTCTTGAACCATTTGGCACTGATACCCTGTTCTTTGCATTTTATTATCAACAGAACACTTACCAGCAGTATTTGGCTGCAAAGGAACTAAAGAAGCAGTCCTGGAGATACCACAAAAAGTACAACACATGGTTTCAGCGGCATGAAGAGCCCAAAGTTGCTACAGATGAATATGAGCAAGGAACATATGTGTACTTCGATTTTCATATAGCAAATGATGACCTGCAGCATGGGTGGTGTCAAAGAATCAAGACTGAGTTCACTTTTGAGTATAACTATCTTGAAGATGAGCTTCTTGTATAG 2682 0.4433 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKNRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVETLEDLVAIPPGLAKVTPGLSLKNSLATTASQSASATASQTSEQADETASQDSNSDIGVRTPPAKSSGISSATSTPAGNHAAPVSVNVSAHNLSSAPAAASVLAGSNSVRSPSENTNAGNSTSVNQSPSLKEDEINSFPGRRPSPSLSDAPLRSIGRNNLSNQATTSIPLGAGNMVSNNGALGSVPSASEITKRNMLAADDRLGSSGMVQPLVSPLSNNRMILPQVAKANDGTASVDSNTANEAAAVSSRVFSPSVVPGMQWRPGSPFQNQSDVGQLRGRAEIAPDQREKFLQKYQQVQQQGHSTLLNMPSLGGNHKQFSAQQQNPLLQQFNSQGSSVSSQSGIGLGVQSPGLSGISSTSLQQPPNSVHSPSSQQPLMSGLSRDADVGNSKVEEQQHQNYPDESATESTASTGIGKNLINEDDLKSAYAVDSPAGASASLGEPGQTSRDIDLSPGQPLQSNQPTSNLGVIGRRNGADLGAIGDNFTGSSSNVNSSGVRDQLYNLQMLEAAHYKLPLPRDSERPRPYTPRHPAITPPSYPQVQAPIVNNPTFWERVGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELLV* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1935 893 MobiDBLite consensus disorder prediction 569 648 - -
Dod01g1935 893 Pfam NOT2 / NOT3 / NOT5 family 750 887 IPR007282 GO:0006355
Dod01g1935 893 Gene3D - 732 888 IPR038635 -
Dod01g1935 893 Coils Coil 41 61 - -
Dod01g1935 893 MobiDBLite consensus disorder prediction 271 318 - -
Dod01g1935 893 MobiDBLite consensus disorder prediction 569 618 - -
Dod01g1935 893 PIRSF NOT_su_3_5 1 893 IPR012270 GO:0006355|GO:0030015
Dod01g1935 893 MobiDBLite consensus disorder prediction 389 410 - -
Dod01g1935 893 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Dod01g1935 893 MobiDBLite consensus disorder prediction 343 371 - -
Dod01g1935 893 PANTHER BNAA10G16600D PROTEIN 1 893 - -
Dod01g1935 893 MobiDBLite consensus disorder prediction 110 131 - -
Dod01g1935 893 MobiDBLite consensus disorder prediction 677 707 - -
Dod01g1935 893 Coils Coil 132 159 - -
Dod01g1935 893 MobiDBLite consensus disorder prediction 343 410 - -
Dod01g1935 893 MobiDBLite consensus disorder prediction 672 709 - -
Dod01g1935 893 PANTHER CCR4 NOT-RELATED 1 893 IPR040168 GO:0030015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1935 K12580 - gmx:100785965 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1935 01 54522510 54532392 Dod01g1935 01 54522510 54532392 ECH