Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1887 ATGGTGTTGGGATCAACCATAAAGGAACTAGTACTAAAAGTAATCAAACCAAGAGTGATTTTTTATAGTATAGTTTCAAGCAACAAGGTTCCACCACCAGGATGTATTCCCTATAGACGGAGAAAGGACAACACAGATCAAACAGGAGGAACAGAGGAGATCATAGAAGTACTCATGGTTTCGTCGCCAAAACGTGATGACCTTGTATTTCCAAAGGGTGGATGGGAGGATGATGAGACAGTTACCGAAGCTGCTTGCCGTGAAGCATTAGAGGAAGCAGGAGTTAAAGGAATACTAAGAGAAATTCCATTGGGAATATGGGAGTTCAGAAGCAAAAGCAGCCAGGACTTATGTTGCCTGGAAGGAGGCTGCCGAGGATACATGTTTGCCTTGGAGGTGACTGAAGAACTTGAGACTTGGCCAGAGCAGAAAAACCGCGATCGCCAGTGGTTAAACATAAAAGAGGCATTTAGACTCAGTCGGTACGACTGGATGTGTAGCGCGCTGGAGGAGTTCATGAGAGTCATAGCAGAAGACAGAAAGCATAAGAAGCAAGAGGAGAACGTTGATCCCCCTTCAGCTCTAGTAGCAGACGTGTCAGAATGTCAAAGTATGTCACCCAATTGCTATAAAAGAAACTCTACAATGCAGCACCATAGTATGCCTCCTAAAACCAATCTCCTGTCACGTGCTTCTCAAGAGATAACCATCCACTTTAGCTATTGA 726 0.4435 MVLGSTIKELVLKVIKPRVIFYSIVSSNKVPPPGCIPYRRRKDNTDQTGGTEEIIEVLMVSSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREIPLGIWEFRSKSSQDLCCLEGGCRGYMFALEVTEELETWPEQKNRDRQWLNIKEAFRLSRYDWMCSALEEFMRVIAEDRKHKKQEENVDPPSALVADVSECQSMSPNCYKRNSTMQHHSMPPKTNLLSRASQEITIHFSY* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1887 241 ProSitePatterns Nudix box signature. 73 94 IPR020084 GO:0016787
Dod01g1887 241 ProSiteProfiles Nudix hydrolase domain profile. 28 173 IPR000086 -
Dod01g1887 241 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 34 201 - -
Dod01g1887 241 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 34 201 - -
Dod01g1887 241 Pfam NUDIX domain 57 164 IPR000086 -
Dod01g1887 241 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 28 176 - -
Dod01g1887 241 CDD Nudix_Hydrolase_9 34 165 - -
Dod01g1887 241 SUPERFAMILY Nudix 35 183 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1887 Dod-Chr1 53740905 53744163 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1887 K07766 - gmx:100794003 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1887 01 53740905 53744163 Dod01g1887 01 53740905 53744163 ECH