Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1866 ATGAATTCAGGGCCAAATACAGACTCATTAGCTGATGCTTTAGCAATTGCTCAACACCATGATGCCGTCACTGGCACAGAACAGCAGCATGTGGCCAATGATTATTCGAAACGATTGTCAATAGGCTACAAGGAGGCAGAGGAATTGGTTTCATCATCACTGGCTTGCTTGGTTGAGTCAACATATCTTACTAGATGTCAGAACCCAGTCACAAAGTTTCAACAATGTCCACTTTTGAACATAAGTTACTGTCCTTCCTCAGAAGTTGAGCTAGATCAAGGAAAGAATTTGGTTATTGTGGTTTACAACTCTCTTGGGTGGAAGAGGAATGAAGTGATTCGAATTCCTGTTGCCAATGACAATGTTGCAGTTCATGACCCTAACGGTATAGAAATAGAATCTCAACTTCTTCCTCTGGCTGAGGCCTTTGCCGGCTTAAGAAACTTCTATGTCAAGGCATATTTGGGACAAACTCCACCCAAGACACCCAAGTATTGGCTTGCATTTACAGTTTCTGTACCACCACTTGGTTTTAGCACATACACTGTCTCAACTTCCAAAAGGACAGGTTCCACCAAATCAACAATATATACATATCAAAGTAATGAAAAGTCTGAGTTTGATGTTGCTAATGGAAACTTGAAACTTACATTTTCTATGGATCAAGGAAAGCATGTCAATTATGTTAATATCAGAAGCATGGTTGAGGAACAAGTTGAACAGAGGTACCTTTACTATACAGGATATAATGGATCCAATCAAAAAGATCCGCAGAATTCTGGGGCCTATGTTTTCCGTCCAAATGGCACATATTACATAAATCATGAAAGACAGGTTCCTTTGACTGTTTTGCGTGGACCGGTGCTAGATGAAGTGCATCAACAAATCAATCCATGGATATATCAGATTACCAGACTACACAAAGGAAAGGAGCATGTTGAAGTAGAGTTTATTGTTGGCCCTATACCTATTGAAGATGGAATTGGTAAAGAAGTTGCCACTCAGGTTTCAACTACTATGGATACCAAAAAAACATTTTACACAGATTCTAATGGGCGTGAGTTTATCAAAAGGATATGTGACTACAGAACAGACTGGAACCTGGAAGTGAATCAGCCCATTGCTGGAAATTATTACCCTATTAATCTAGGGATATACATAAAAGATAATAAGACAGAATTCTCAGTTTTGGTGGATAGATCTGTCGGAGGTTCTAGCCTAGAAGATGGACAAATAGAGCTGATGCTCCACAGGCGATTGCTACTTGATGATTCAAAAGGTGTTGCTGAGGCTCTAAATGAAACAGACTGTGTTGCTGATGATTGCAGGGGCCTAACTGTCCAAGGTAAATTTTACTACAGGATAGATCCCTTGGGTGAGGGTGCTAAGTGGCGCCGAACTTTTGGCCAGGAAATATATTCTCCACTTCTGTTAGCTTTTTCTGAAAAGGACGACAAAGATGACTGGATGAATTACCATGTGCCAACATTTTCAGGAATTGATTCTTCTTATACATTACCTGATAACATCGCTATTATAACATTACAGGAACTTGAGGATGGGACAGTTCTCCTTCGGTTAGCACATCTATACGAGATTGGAGAAGACAGGGATCTATCTGTAATGTCAAGTGTGGAGCTGAAAAAGCTCTTCCCTGGGAAGAAGATCAAAGAGGCGAAAGAGACGAGCTTATCAGCCAATCAAGAAAGGTCAGAGATGGAGAAGAAAAGGCTTGCATGGAAGGTAGAAGGGTCTTTTGGAGATGAACATGTTTCAAGGGGAGGCCCAGTTGATCCAAAAGAGCTAGTTGTGGAGCTTGCTCCTATGGAAATCCGCACTTTTATCATTTACTTTGACATTGTGCATAACCTTCTCTCGGATGCTTAG 1887 0.4075 MNSGPNTDSLADALAIAQHHDAVTGTEQQHVANDYSKRLSIGYKEAEELVSSSLACLVESTYLTRCQNPVTKFQQCPLLNISYCPSSEVELDQGKNLVIVVYNSLGWKRNEVIRIPVANDNVAVHDPNGIEIESQLLPLAEAFAGLRNFYVKAYLGQTPPKTPKYWLAFTVSVPPLGFSTYTVSTSKRTGSTKSTIYTYQSNEKSEFDVANGNLKLTFSMDQGKHVNYVNIRSMVEEQVEQRYLYYTGYNGSNQKDPQNSGAYVFRPNGTYYINHERQVPLTVLRGPVLDEVHQQINPWIYQITRLHKGKEHVEVEFIVGPIPIEDGIGKEVATQVSTTMDTKKTFYTDSNGREFIKRICDYRTDWNLEVNQPIAGNYYPINLGIYIKDNKTEFSVLVDRSVGGSSLEDGQIELMLHRRLLLDDSKGVAEALNETDCVADDCRGLTVQGKFYYRIDPLGEGAKWRRTFGQEIYSPLLLAFSEKDDKDDWMNYHVPTFSGIDSSYTLPDNIAIITLQELEDGTVLLRLAHLYEIGEDRDLSVMSSVELKKLFPGKKIKEAKETSLSANQERSEMEKKRLAWKVEGSFGDEHVSRGGPVDPKELVVELAPMEIRTFIIYFDIVHNLLSDA* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1866 628 Gene3D - 85 209 IPR013780 -
Dod01g1866 628 SUPERFAMILY Families 57/38 glycoside transferase middle domain 6 61 IPR028995 -
Dod01g1866 628 Coils Coil 556 576 - -
Dod01g1866 628 PANTHER ALPHA-MANNOSIDASE 2 622 - -
Dod01g1866 628 Pfam Glycosyl hydrolases family 38 C-terminal domain 210 425 IPR011682 GO:0004559|GO:0006013
Dod01g1866 628 Gene3D - 495 622 - -
Dod01g1866 628 Gene3D Glycoside hydrolase family 38, central domain 6 62 IPR037094 GO:0004559|GO:0006013
Dod01g1866 628 SUPERFAMILY Galactose mutarotase-like 61 618 IPR011013 GO:0003824|GO:0005975|GO:0030246
Dod01g1866 628 Gene3D - 210 474 - -
Dod01g1866 628 PANTHER ALPHA-MANNOSIDASE 2 622 - -
Dod01g1866 628 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 509 615 IPR041147 -
Dod01g1866 628 Pfam Alpha mannosidase middle domain 7 57 IPR015341 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1866 Dod-Chr1 53401960 53410261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1866 4 532 Glycoside Hydrolase AT5G13980 66.292 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1866 K01191 - gmx:100776282 1080.86