Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1830 ATGCATGCAGGTAAAGTTTTGGGGATGCTTGGAAGCGTGCAGCTGGATCTTCAAAAGATTCTTGATAGCTATCGTGCTCACATATTGCTGACAATAACGAATCCATCAGAGTCTCTTCTTAATGAACTAAGAACTGTTGAGGACATGAAGCGGCAATGTGATGAAAAAAGAGAAGTTTATGAATATATGATTGCCCAGCAGAAAGAAAAAGGAAGGTCAAAAAGTGGTAAAGGTGAAAGTATTACTCCACAGCAGCTGCAGGCAGCTCATGATGACTTTGAAGAAGAAGCAACACTCTGTGCCTTTCGGTTAAAATCCCTGAAGCAAGGGCAGTTACGTAGTCTCCTAACACAAGCAGCTCGTCACCATGCTGCCCAGTTAAATTTCTTTCGGAAGGGACTCAAATCTCTGGAGGCTGTTGAGCCACATGTGAGGATGATTGCTGAACAACAGCATATTGATTATGAATTCAGTGGCCTTGAAGAAGATGATGGTGAAGTTGGTTCTGACGACGATGATGACAATGATGATGACGACGATGACGATGAATATGAGGCCAATGAAGCTGGTGAATTGAGTTTTGACTATAGATCAAACAAGCAGGGGCTTGATGTTGTCTCCACATCACCAAACTCAACAGAGGTGGAGGAATCAGGTCGTTCATATCCTCGAGCTTCAACCACCGAAACTGTGGAGACAAGTTTAGACAAAAACCAAGGAGATTTTAAGTTCTCAGGTAGAGATCAAAGGGTCAGCAGCTATTCAGCTCCAATATTTGCAGAAAAGAAATTTGACCCAGCTGAGAAAGCAAGACAACTGGTAGCATCATCTGCAGCTAAGTCCAGTGCTTATGTACTTCCTACACCTGTCAACGTAATAGAAGCAAAAAGTAGCTCAGCCCCCCGCATAAGTGCAAGTGGAATTTCACATAATCTATGGCATTCTTCCCCTTTGGATGAAAAAAAGAATGAGAAAGAACCAACTATCCCTAGAGCCCCCTCAGTTCTCAAAGAAAGCAACAGTGATACTACGTCCACCCAGTTACCACGCCCACTATCACTTCCACAAGTTGATTTCAATGCTTTTGATACTACTAAGAAAATTAAAAGACAAGCATTTTCAGGTCCATTGACTAATAAACCATTGTTAGTGAAACCTGTTTCATCTGGCGTTTCTATAGGATCAACTGAATTGCCACCTCTAGTTTCTGGGGTTTTTCAACGTTTACCAATGCCTCAGCCTTCATCGCCAAAAGCATCTCCTACTGCTTCACCTCCTCTTGTTTCTTCACCTAGGATAAGTGAGCTTCATGAGCTTCCTAGACCCCCTGGTAATCAGTCCACTAAGCAATTGAAATCTTTTAGAACAGGTCACTCTGCTCCATTAGTATTCAGAAATCCAGAGCATCATACGGCAAATAGATTTCCTACTGTTGTATCAAGTGCAGCATCTCCACTTCCAACTCCTCCGATAATTGTCTCACGGAGTTTTTCTATACCTTCTAGTGGTCAGAGAGCTATGGCACTAAATGTTACTAAGTTTTTGGATACTCCCCAAGTTCCTGAGAAGGTCGAAGAATCTGCATCTTCTCCACTAACACCTATAGCTCCGAGAGCATCAAGTATATCTGACCTAGCTTCTCACTCTAGTGAAATCCAAGTGGATGCAGGTGGGAGCTGA 1680 0.4274 MHAGKVLGMLGSVQLDLQKILDSYRAHILLTITNPSESLLNELRTVEDMKRQCDEKREVYEYMIAQQKEKGRSKSGKGESITPQQLQAAHDDFEEEATLCAFRLKSLKQGQLRSLLTQAARHHAAQLNFFRKGLKSLEAVEPHVRMIAEQQHIDYEFSGLEEDDGEVGSDDDDDNDDDDDDDEYEANEAGELSFDYRSNKQGLDVVSTSPNSTEVEESGRSYPRASTTETVETSLDKNQGDFKFSGRDQRVSSYSAPIFAEKKFDPAEKARQLVASSAAKSSAYVLPTPVNVIEAKSSSAPRISASGISHNLWHSSPLDEKKNEKEPTIPRAPSVLKESNSDTTSTQLPRPLSLPQVDFNAFDTTKKIKRQAFSGPLTNKPLLVKPVSSGVSIGSTELPPLVSGVFQRLPMPQPSSPKASPTASPPLVSSPRISELHELPRPPGNQSTKQLKSFRTGHSAPLVFRNPEHHTANRFPTVVSSAASPLPTPPIIVSRSFSIPSSGQRAMALNVTKFLDTPQVPEKVEESASSPLTPIAPRASSISDLASHSSEIQVDAGGS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1830 559 MobiDBLite consensus disorder prediction 334 353 - -
Dod01g1830 559 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 3 551 IPR037488 -
Dod01g1830 559 CDD BAR 4 143 - -
Dod01g1830 559 MobiDBLite consensus disorder prediction 533 559 - -
Dod01g1830 559 MobiDBLite consensus disorder prediction 309 353 - -
Dod01g1830 559 Gene3D Arfaptin homology (AH) domain/BAR domain 2 164 IPR027267 -
Dod01g1830 559 MobiDBLite consensus disorder prediction 441 455 - -
Dod01g1830 559 MobiDBLite consensus disorder prediction 200 241 - -
Dod01g1830 559 SUPERFAMILY BAR/IMD domain-like 3 146 IPR027267 -
Dod01g1830 559 MobiDBLite consensus disorder prediction 406 455 - -
Dod01g1830 559 MobiDBLite consensus disorder prediction 161 189 - -
Dod01g1830 559 MobiDBLite consensus disorder prediction 161 241 - -
Dod01g1830 559 MobiDBLite consensus disorder prediction 520 559 - -
Dod01g1830 559 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 3 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1830 Dod-Chr1 52869834 52878413 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1830 - - gmx:100775799 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1830 01 52869834 52878413 Dod01g1830 01 52869834 52878413 ECH