Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1778 ATGGCGGCAATTCAAATATCCGACCAAGATCCTAAGTCATTGCCACGCAGTCCACATTCATTACCAAAACTATTTCCCTCCATTCCAAATTTATCCCAACAACCCCCTGAAATCCCAAAATCCATGGTAAAATCCCGAAATCCCCAAATTGCCCCATTCATTCATCTTCTCCCGCAAGCTTCACGAATTTTTCAAATCACCCGCTCCCATTTTCATTCATTCAATTCAAAATCCTCTTCCTTCCAAAATGAAACCCTTCATCGCCACTCCCTATTTAAATGCCTCATCCCTCCCTCTCCACTACCAAGCCTCACCAGCAAACAAAACCTACACTCACCAATTACTCTCCACTTTATCACTTCATCTTCTCATCTCTCAAATCAGCCAAATATGCCTGCGATCCCAGAGGAGCCACTTCTAGCTCCAAACCCAGACCGATTCTGCATGTTCCCAATCCAATACCCTCAGATATGGGAAATGTACAAGAAAGCTGAAGCCTCCTTCTGGACCGCCGAGGAGGTTGACCTCTCCGCCGACCTCCGCCACTGGGACACCCTCACAGACGGCGAGCGCCACTTCATCACCCACGTCCTTGCTTTCTTCGCCGCCTCTGACGGCATCGTCCTCGAGAACCTCGCCGGAAGGTTCATGAAAGAGGTCCAAGTTTCGGAGGCGCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATCAAAGACTCAGCAGAAAAGAATCGCCTCTTCCACGCCGTCGAGACCATCCCTTGCGTAGCCAAGAAGGCCGACTGGGCCCTGCGCTGGATCGACGGCTCAGAATCCTTCGCGGAGCGCCTCGTTGCCTTCGCATGCGTCGAAGGGATCTTCTTCTCCGGAAGCTTCTGCGCGATATTTTGGCTCAAAAAGCGCGGGTTAATGCCCGGGCTGACCTTCTCGAACGAGCTGATATCGCGAGATGAAGGGCTTCACTGCGATTTCGCGTGCTTGTTGTACTCTCTGATGAGGAAGAAGCTCCCAGAGGAGCGCGTGAAGGGGATCGTGAAGGACGCTGTGGACATCGAGAGGGAGTTTGTGTGCGACGCGCTGCCGTGCGCGTTGGTTGGGATGAACGGGGACCTTATGAGTCAGTACATTGAGTTCGTCGCGGATCGGTTGCTGGTGGCGCTTGGGTGCGGGAAGGTGTACAATGTTCAGAACCCGTTTGATTGGATGGAGTTGATCTCGCTTCAGGGGAAGACCAACTTCTTTGAGAAGCGCGTTGGGGAGTACCAGAAGGCTTCCGTGATGTCTAGCTTGAACGGCCATGGTGCCGTCCACGTGTTCAAGATGGATGAAGACTTTTAA 1380 0.5246 MAAIQISDQDPKSLPRSPHSLPKLFPSIPNLSQQPPEIPKSMVKSRNPQIAPFIHLLPQASRIFQITRSHFHSFNSKSSSFQNETLHRHSLFKCLIPPSPLPSLTSKQNLHSPITLHFITSSSHLSNQPNMPAIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSADLRHWDTLTDGERHFITHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSAEKNRLFHAVETIPCVAKKADWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLPEERVKGIVKDAVDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLVALGCGKVYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGHGAVHVFKMDEDF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1778 459 ProSitePatterns Ribonucleotide reductase small subunit signature. 235 251 IPR030475 -
Dod01g1778 459 Pfam Ribonucleotide reductase, small chain 146 412 IPR000358 GO:0009263
Dod01g1778 459 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 135 459 - -
Dod01g1778 459 MobiDBLite consensus disorder prediction 1 43 - -
Dod01g1778 459 MobiDBLite consensus disorder prediction 26 40 - -
Dod01g1778 459 Gene3D Ribonucleotide Reductase, subunit A 119 437 IPR012348 GO:0016491
Dod01g1778 459 CDD RNRR2 147 421 IPR033909 GO:0009263
Dod01g1778 459 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 135 459 IPR000358 GO:0009263
Dod01g1778 459 SUPERFAMILY Ferritin-like 134 437 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1778 Dod-Chr1 51664714 51666093 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1778 K10808 - zju:107427918 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1778 01 51664714 51666093 Dod01g1778 01 51664714 51666093 ECH