Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1754 ATGGCTCTCTTGGCTTTGACCCTATGCCTCTTATTCTTAGCATTTGTGCATCATCAAGCAGCACAAGCTTCAAGCCGTGGTGGATTCTTTGGCAGAAAACGTGTTGCTGATTACCCCCCCGTATATGGTATATGCGCCTCTTCTGTCGTTGTTTACGGATACAAGTGCCAGGAAATAGAAGTTACAACCAAAGATGGGTATATTCTGAGCCTGCAAAGGATCTCAGAAGGCAGAGCCGGAGTTGGTGGTGGCAGTGGGACTAAGAAGCAGCCAGTGATAATACAGCATGGAGTATTAGTGGATGGAATGACATGGCTTCTGAACGGGCCAGAGCAAGACCTGCCCTTGATCTTAGCTGATAATGGCTTCGACGTGTGGATTGCTAACACCAGAGGGACCAGATACAGCCGCGGACATACCTCATTGGACCCTTCTTCTACGGCCTATTGGAATTGGTCTTGGGATGAACTGGTTACCTATGATTTACCTGCTGTGTTTGATTATGTGTCCAGCCAAACAGGGCAAAAGATTAATTACGTGGGCCATTCTCTGGGGACCTTGATAGCTTTGGCTTCCTTCTCGGAAGGGAAATTGGTGAACCAGCTGAAATCAGCAGCATTGTTGAGCCCTGTCGCCTATTTGAGTCACATGACCACCGCACTTGGAGTTGTTGCAGCCAAAGCCTTTCTTGGTGAGATCACTACCCTAGTTGGTGTGGCAGAATTCATTCCCAAAGGGTTACCTGTGAGGGTCTTTCTCAAGTCTCTTTGCGCTCACGCTGGGGTTGATTGCTACGACTTGTTGACTGCATTAACTGGTAAAAATTGCTGCCTCAATTCTTCAACCGTTGATCTATTCTTGAGGAATGAACCTCAGTCAACATCAACAAAGAACATGGTGCACTTGGCTCAGACTGTTAGATATGGGGTTCTGGCAAAGTTCAATTATGTGAGGCCAGACTATAATATTATGCATTATGGAGAAGTATTCCCTCCAATCTATAACCTTTCCAATATCCCCCATAACCTGCCTCTCTTCATTAGCTATGGGGGCCGAGATGCTCTTTCCGATGTTCGCGATGTTGGGAATTTACTTGATTCCCTAAAGTTCCATGATGTTGATAAGCTGAGTGTTCAGTTCATCAAGGACTATGCTCATGCTGACTACATTATGGGGGTCAATGCCAAGGACGTGGTGTATAATGCTATCCTTTCATTTTTCAACCGTCAATTTTAA 1236 0.4579 MALLALTLCLLFLAFVHHQAAQASSRGGFFGRKRVADYPPVYGICASSVVVYGYKCQEIEVTTKDGYILSLQRISEGRAGVGGGSGTKKQPVIIQHGVLVDGMTWLLNGPEQDLPLILADNGFDVWIANTRGTRYSRGHTSLDPSSTAYWNWSWDELVTYDLPAVFDYVSSQTGQKINYVGHSLGTLIALASFSEGKLVNQLKSAALLSPVAYLSHMTTALGVVAAKAFLGEITTLVGVAEFIPKGLPVRVFLKSLCAHAGVDCYDLLTALTGKNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRYGVLAKFNYVRPDYNIMHYGEVFPPIYNLSNIPHNLPLFISYGGRDALSDVRDVGNLLDSLKFHDVDKLSVQFIKDYAHADYIMGVNAKDVVYNAILSFFNRQF* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1754 411 Pfam Partial alpha/beta-hydrolase lipase region 52 109 IPR006693 GO:0006629
Dod01g1754 411 SUPERFAMILY alpha/beta-Hydrolases 52 408 IPR029058 -
Dod01g1754 411 Pfam alpha/beta hydrolase fold 113 226 IPR000073 -
Dod01g1754 411 PANTHER LYSOSOMAL ACID LIPASE-RELATED 8 410 - -
Dod01g1754 411 PANTHER TRIACYLGLYCEROL LIPASE 2 8 410 - -
Dod01g1754 411 PIRSF Steryl_ester_lip 1 411 IPR025483 GO:0016788
Dod01g1754 411 Gene3D alpha/beta hydrolase 40 409 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1754 Dod-Chr1 51150361 51157327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1754 40 410 Acyl Lipid Metabolism Gene Families AT2G15230 37.736 1.76e-91 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1754 K01052 - gmx:100779460 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1754 01 51150361 51157327 Dod01g1754 01 51150361 51157327 ECH