Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1750 ATGGATGATTTAAAGTCAGCTCATGGTGCTTTGTCCATTTCCTTTTCTTCCTCTATTTGGTGTAGGCACTTTGTCCCCAATTTAACTATTGGTGCTCCTGTCATTGAAAGTTTGAGAAAGCACACAGAGGCATATCTGGACTGTCACCTGATGGTTACAAATCCTCTTGATTATGTTGAACCTTTGGGAAAAGCTGGTGCTTCTGGCTTTACATTTCATGTAGAGGCATCTAAAGATAACTGGCAAGAACTTATTGAAAGAATAAAGTCAGCAGGCATGAGGCCTGGTGTAGCATTGAAGCCTGGGACCCCCATTGGAGAGGTTTATCCTCTGGTTGAAGCTGAAAATCCTGTGGAAATGGTTCTTGTGATGACTGTAGAGCCTGGATTTGGAGGACAAAAATTTATGCCAGAGATGATGGATAAGGTACGGACACTGAGGAGGAAGTATCCATCACTTGACATAGAGGTTGATGGTGGTTTAGGGCCTTCAACCATAGACATGGCCTCATCTGCAGGGGCAAATTGCATTGTTGCAGGAAGTTCAGTGTTTGGAGCCCCTGAGCCAGCTCAAGTTATATCCTTACTGAGGAATTCTGTTGAGAAAGGCCAGCAAGCATATTGA 624 0.4391 MDDLKSAHGALSISFSSSIWCRHFVPNLTIGAPVIESLRKHTEAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEASKDNWQELIERIKSAGMRPGVALKPGTPIGEVYPLVEAENPVEMVLVMTVEPGFGGQKFMPEMMDKVRTLRRKYPSLDIEVDGGLGPSTIDMASSAGANCIVAGSSVFGAPEPAQVISLLRNSVEKGQQAY* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1750 207 Pfam Ribulose-phosphate 3 epimerase family 22 184 IPR000056 GO:0005975|GO:0016857
Dod01g1750 207 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 121 143 IPR000056 GO:0005975|GO:0016857
Dod01g1750 207 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 19 205 IPR000056 GO:0005975|GO:0016857
Dod01g1750 207 SUPERFAMILY Ribulose-phoshate binding barrel 22 201 IPR011060 -
Dod01g1750 207 CDD RPE 23 197 IPR000056 GO:0005975|GO:0016857
Dod01g1750 207 PANTHER RIBULOSE-PHOSPHATE 3-EPIMERASE 19 205 - -
Dod01g1750 207 Gene3D Aldolase class I 9 207 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1750 Dod-Chr1 51079369 51083924 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1750 K01783 - vvi:100242409 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1750 01 51079369 51083924 Dod01g1750 01 51079369 51083924 ECH