Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1738 ATGACTGAAAGTGAAATGGAGGTTAAAGGTTTGATTGATGCTCTTGGACTTCAAGAAAAGCAACAATTTCCAAAGTCACAGCATAAGCGCTATATTGTGAAAAATGGTACACCACTTCTGGTACCCACAAATCCTGCTGCACTACTGAAGACCAAACTCCTCTCTGCTCGATCAAAGATCCAGGTGATTTTTGAACCATTTTTGTGGAAAAGAAATGACCCCTCTAATTTGTGTGATGAAAATTCCACAGAAAGTGTTGGTAGTTTCTTTGAACGTCATTTTGGGAAAGAGGTTGTGGACTATCTTATTGATCCTTTTGTTGGAGGTTCAAGTGCAGCAGATCCTGAATCCCTTTCTACTTGCCATTCTTTCCCAGAGCTTTGGGATTTGGAGAAAAGGTTTGGCTCCATTATAGCTGGAGCTTTGCAATCAAAGTTATTTTCCAAACGGGAAAAAACTGGTGAAAGTAAGGGTGCAGTAAGAAAAGACAAGCACAAGCGTGGTTCATTTTCTTTCTTGGGTGGGATGCAGACACTAACTGATGCATTGTGCAAAGAGCTTGGCCAAGATGACATTAAATTAAATGCAAAGGTTTTGACATTAGCTTACAATCATGATGGAAGTTCCACTTCCCAAAATTGGTCTATTACTTGTGCTTCCAACCAAAATGTAGAAGCTGTTGATGCAGTAATTATGACGGCTCCTCTATCTAATGTCAAGGACATGAAGATCACAAATAAGGGTTCCTCTTTCCCTCTTAATTTTCTTCCCGAGGTGACCTATGTGCCACTCTCGGTCATAATTACCACCTTTAGAAAGGAGAATGTAAAGAGACCACTCGAGGGATTCGGAGTTCTTGTTCCTTCAAAAGAGCGAGAAAATGGTTTAAAAACCCTTGGTACACTATTTTCCTCTATGATGTTTCCGGATCGTGCTCCCAGCAATTTATATCTCTATACCACCTTTGTAGGGGGAATACGAAACACGGAACTTGCACAAGCTTCAATTCATTTCTATTGGAGCAAAGGCTTTCCTTTGTATGGGCATAACTATGGATCAGTTCTCGAAGCAATTGACAAGATGGAAAAAGACCTTCCTGGATTTTTCATTGCAGGTAACCATAAAGGTGGACTCTCAGTTGGCAGAGCAATTGCCTCGGGTTGTAAAGCTGCTGATCTTGTAATTTCCTACCTCAACTCTGCTTCAGATAATGCAGTGTCCGATAAATGA 1230 0.4073 MTESEMEVKGLIDALGLQEKQQFPKSQHKRYIVKNGTPLLVPTNPAALLKTKLLSARSKIQVIFEPFLWKRNDPSNLCDENSTESVGSFFERHFGKEVVDYLIDPFVGGSSAADPESLSTCHSFPELWDLEKRFGSIIAGALQSKLFSKREKTGESKGAVRKDKHKRGSFSFLGGMQTLTDALCKELGQDDIKLNAKVLTLAYNHDGSSTSQNWSITCASNQNVEAVDAVIMTAPLSNVKDMKITNKGSSFPLNFLPEVTYVPLSVIITTFRKENVKRPLEGFGVLVPSKERENGLKTLGTLFSSMMFPDRAPSNLYLYTTFVGGIRNTELAQASIHFYWSKGFPLYGHNYGSVLEAIDKMEKDLPGFFIAGNHKGGLSVGRAIASGCKAADLVISYLNSASDNAVSDK* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1738 409 PANTHER PROTOPORPHYRINOGEN OXIDASE 1 398 - -
Dod01g1738 409 SUPERFAMILY FAD-linked reductases, C-terminal domain 261 335 - -
Dod01g1738 409 TIGRFAM proto_IX_ox: protoporphyrinogen oxidase 8 333 IPR004572 GO:0004729|GO:0006779
Dod01g1738 409 Gene3D protoporphyrinogen ix oxidase, domain 3 41 147 - -
Dod01g1738 409 SUPERFAMILY FAD/NAD(P)-binding domain 8 398 IPR036188 -
Dod01g1738 409 Gene3D - 170 287 IPR036188 -
Dod01g1738 409 Gene3D - 312 409 IPR036188 -
Dod01g1738 409 PANTHER PROTOPORPHYRINOGEN OXIDASE 1 398 - -
Dod01g1738 409 Pfam Flavin containing amine oxidoreductase 7 334 IPR002937 GO:0016491
Dod01g1738 409 Pfam Flavin containing amine oxidoreductase 336 395 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1738 Dod-Chr1 50940996 50955102 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1738 K00231 - gmx:547941 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1738 01 50940996 50955102 Dod01g1738 01 50940996 50955102 ECH