Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1735 ATGTCATACTCCAAGTCCAAGTGCCTTGGCTCAAATAGGGACAGAGGCCCTTTGCGGGTTGCAGCTTACTGTTTCAAGCAGCTCAAGAAGCCTCAGCTCCTTGACACTGACATTTCTTCCTCTGTTGACAAGATTTTGCAGGATGCAATGAATGGTGTCTCCTACAGAGTGCTGGCCTATCTTCTTCTTGGTGTTGTCAGAATATACTCAAAAAAGGTGGAATATTTGTTAAATGATTGCAATGAGGTGCTTATTAGAATAAAAAAATTCCTGATCAAAACAAAAGACAATGCACCTGTGGAAACCCTGCGTATGTCTGTTATTATACCAGACAGATTTGAGTTGGATGCTTTCAATCTGGATATACTTGAAGATGCTGGCGAAGGCCATATTGCTCCCCAAGAAGAAATTACTCTTAAAGATGTTTTGTGTAATACTGAGGGATTTGGGCAGTTTTCTTTAGACAAGTTTGAGAAGTTTGATTTTTGCCAAAATTCCTGCGCTGCTGATCACCTTGTGTTGGAAGATGTTTGTCAGTCTCGCCAGATGGATTTTGACTATGAAGTTTTCCTGCCAAATAGTCCAAGTAATTCATTGGAAGGCAGGGATATATCTCAAAACAGCATATTCTCTCCGAAGGAGCCAATGAACTTCAACGTTGCTTTGTTAGCTGAAGGAGTAGAAAAAGAATCTGTCAACACGTTTATTCAAGATCAACAAGTTAATGAAGATCAGGAAATTCATGCAAGTGTAGCGTATGAGGATGAAATACTCGAAGAAAGAAGTAGAACCTCTAGAGCGGGATCTGTGGACGTCAGTTTGTCTTTTGGGAGAGAGAAGGAACCTGTGTTATCTGTTGAAGCATTTAATGAATTTCATCAAGTTGATGAAGAGCAGAGTATAGCTATAGAAACATCAAGCTCATTATGCTGTATACATCAGGAAATTAGAGAAGTTCATGAATCAAGAAATTTTCAAGAAAGTATGGATCTGAAAGAACGCATGGACTATGGTAAATCCTCTGTTTCCAGGGAAAACCTTGAAGAACTCATTGAAGGGTCTGTTGAACAACATGAGAAGGAGAGAAAGTTAGAGTTTCAAGAAAAGGTTTTACTTGAAGATGAAAATGTTATTCCACCGGAGTCAAAAACTCTTGATGTAACTCCTCAGTCTAAGTTTCAAGGAGGTTCAGTTGGAAAGCGAAAATCAGGTGTTACCACAGAGTCTATGCTGATTTCTACACCAGCTGTAAGAGATCGTGCCTTCTTTTCAAGGAAAAGTAGAATTGTTATTGATGGAATGTTAGTCCTGTCTAATGAGGTACTTAGGAAGAGTATACATGATACAAGTGACCTAATTTCTAACCGCAGAAAATTTCGCCGTACTTTGCTGGCTGTGCAGAGACAATCTTGCATTTCCAGTCTTCCTGAAGGATTCTATGAATCCATGTTTCCTTGTTGCTCCGAAGAACTTCGTTTCCTGTTCTCTAAAAAGAAAATGAAACTATCAGATTCCTTTGAAATTGTGGGAAATCAAGAGGAGTTAGATGTGTCAGAATCTCGAACTGTTGGCAGTACACAGCATAATGCAACTGCTTCACATACTCCTCCTGATTGTCCATGTTCCCTTGAAACTGTAGAAATTCCAGGGAAGTTAGATGTGTCAGAATCTCGAGCTGTTGGCAGTCCAGAGCATATAGAAACTGCTCCACGAACCCCTCCTCAGTTCCCAAAAATAAAAGTTAGATCAATTGAGCAACCAGAGAGAATGGAAATTCAAAACTCTGATAATTTAGGACTTTCAAGTCCACTGGAAAGCATAGAGAGAGAGCAATCTTTGAAAAAGGATCAAGAGCTTAATCTGATGGAGGAGGAGATAAATTCATGTGAAACGGAGAATTCCGAATTGCTAGCCGGGTGGTCCGAGCGAACCAGGAGAGTTGCAAGGTACCTGCACAGGAGTTTTCTGGATCTAAGGAAACAAAGAGATGACGAAGTTGTGAACTTTTCACGAGTTTTTGAAAGACGAATCAGGAAAGAATGTGCAAGGCTGTTTTATGAAATGCTGGTTTTGAAAACTACAAGTTATGTGGATGTGAGGCAAAAGTATGCTTATGGTGATATTGCAGTGTGTAAACTCCCAAAATTAGATCAAACTTTCGGAATTAATGACCTGTAA 2178 0.3972 MSYSKSKCLGSNRDRGPLRVAAYCFKQLKKPQLLDTDISSSVDKILQDAMNGVSYRVLAYLLLGVVRIYSKKVEYLLNDCNEVLIRIKKFLIKTKDNAPVETLRMSVIIPDRFELDAFNLDILEDAGEGHIAPQEEITLKDVLCNTEGFGQFSLDKFEKFDFCQNSCAADHLVLEDVCQSRQMDFDYEVFLPNSPSNSLEGRDISQNSIFSPKEPMNFNVALLAEGVEKESVNTFIQDQQVNEDQEIHASVAYEDEILEERSRTSRAGSVDVSLSFGREKEPVLSVEAFNEFHQVDEEQSIAIETSSSLCCIHQEIREVHESRNFQESMDLKERMDYGKSSVSRENLEELIEGSVEQHEKERKLEFQEKVLLEDENVIPPESKTLDVTPQSKFQGGSVGKRKSGVTTESMLISTPAVRDRAFFSRKSRIVIDGMLVLSNEVLRKSIHDTSDLISNRRKFRRTLLAVQRQSCISSLPEGFYESMFPCCSEELRFLFSKKKMKLSDSFEIVGNQEELDVSESRTVGSTQHNATASHTPPDCPCSLETVEIPGKLDVSESRAVGSPEHIETAPRTPPQFPKIKVRSIEQPERMEIQNSDNLGLSSPLESIEREQSLKKDQELNLMEEEINSCETENSELLAGWSERTRRVARYLHRSFLDLRKQRDDEVVNFSRVFERRIRKECARLFYEMLVLKTTSYVDVRQKYAYGDIAVCKLPKLDQTFGINDL* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1735 725 MobiDBLite consensus disorder prediction 383 401 - -
Dod01g1735 725 Gene3D Structural maintenance of chromosome 1. Chain E 642 720 IPR023093 -
Dod01g1735 725 MobiDBLite consensus disorder prediction 517 540 - -
Dod01g1735 725 MobiDBLite consensus disorder prediction 381 401 - -
Dod01g1735 725 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 721 IPR039781 GO:0007062|GO:0008278
Dod01g1735 725 Coils Coil 607 627 - -
Dod01g1735 725 Pfam N terminus of Rad21 / Rec8 like protein 20 95 IPR006910 GO:0005515
Dod01g1735 725 Pfam Conserved region of Rad21 / Rec8 like protein 665 712 IPR006909 -
Dod01g1735 725 MobiDBLite consensus disorder prediction 517 538 - -
Dod01g1735 725 SUPERFAMILY "Winged helix" DNA-binding domain 643 716 IPR036390 -
Dod01g1735 725 Coils Coil 344 375 - -
Dod01g1735 725 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 1 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1735 Dod-Chr1 50791191 50817436 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1735 K06670 - qsu:112016663 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1735 01 50791191 50817436 Dod01g1735 01 50791191 50817436 ECH