Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1682 ATGTTTACCGATTCTGTCTCTGACGGGTATGCTAGGATGTTAGTGGTTGAACCTTTCTCAGTTGTTCTCGAGATGTACGGATTTGGAAGAATTGGCCGTCTAGTGGCCAGGGTGGCTTTGCAGAGAGATGATGTGGAGCTCGTTGCTGTTAATGATCCTTTTATCGACACTGATTACATGACTTACATGTTCAAGTACGACAGTGTGCATGGACGTTGGAACCACTGCGATATTAAGGTCAAGGACGAAAAAACCCTTCTCTTTGGTGACAAACCTGTCGCGGTTTTTGGCTTTAGGAATCCAGAGGAAATTCCATGGGGTAAGGTTGGAGCTGATTTTGTTGTTGAGTCCACTGGAGTTTTCACTGATAAAGATAAGGCAGCTGCTCACTTGAAGGGCGGTGCAAAGAAGGTAATTATTTCTGCTCCCAGCAAGGATGCACCAATGTTTGTTATGGGTGTCAATCAGAAAGAATACACGTCAGATGTTAATGTAATCTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCACTTGCAAAGATTATTCATGACAAATTTGGTATTGTTGAAGGTCTCATGACCACTGTCCATGCTACTACAGCCACACAAAAGACAGTTGATGGACCATCAATGAAGGACTGGAGAGGTGGTAGAGCTGCTGCCGTCAACATAATTCCCAGTAGTACTGGAGCTGCTAAGGCTGTTGGTAAGGTGTTGCCATCACTGAATAACAAGTTAACAGGAATGTCTTTCCGAGTTCCAACTGTTGATGTCTCAGTGGTTGACCTCACTTGTCGACTTGAGAAGGGAGCCTCTTATGATGAAATTAAAGCGGCTGTCAAGGAGGCATCTGAAGGCAGTATGAAGGGAATTATGGGTTACACAGAGGATGATGTTGTATCTACAGATTTTGTGGGTGACAACAGGTCATGCATTTTTGATGCGAAGGCTGGAATTTCCTTGAATAACAATTTCGTGAAGCTTGTCTCTTGGTATGACAATGAATGGGGCTACAGTACGCGTGTTGTTGACTTGATCCGACACGTTGCCTCTGTTCAGTGA 1065 0.446 MFTDSVSDGYARMLVVEPFSVVLEMYGFGRIGRLVARVALQRDDVELVAVNDPFIDTDYMTYMFKYDSVHGRWNHCDIKVKDEKTLLFGDKPVAVFGFRNPEEIPWGKVGADFVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVMGVNQKEYTSDVNVISNASCTTNCLAPLAKIIHDKFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRAAAVNIIPSSTGAAKAVGKVLPSLNNKLTGMSFRVPTVDVSVVDLTCRLEKGASYDEIKAAVKEASEGSMKGIMGYTEDDVVSTDFVGDNRSCIFDAKAGISLNNNFVKLVSWYDNEWGYSTRVVDLIRHVASVQ* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1682 354 Gene3D - 25 349 - -
Dod01g1682 354 PIRSF GAPDH 21 354 IPR020831 GO:0016620
Dod01g1682 354 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 176 333 IPR020829 GO:0016620
Dod01g1682 354 Gene3D Dihydrodipicolinate Reductase; domain 2 170 335 - -
Dod01g1682 354 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 170 333 - -
Dod01g1682 354 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 169 176 IPR020830 GO:0016620
Dod01g1682 354 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 289 304 IPR020831 GO:0016620
Dod01g1682 354 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 165 183 IPR020831 GO:0016620
Dod01g1682 354 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 192 208 IPR020831 GO:0016620
Dod01g1682 354 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 130 143 IPR020831 GO:0016620
Dod01g1682 354 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 249 266 IPR020831 GO:0016620
Dod01g1682 354 SMART gp_dh_n_7 21 171 IPR020828 GO:0051287
Dod01g1682 354 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 24 345 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Dod01g1682 354 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 23 353 IPR020831 GO:0016620
Dod01g1682 354 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 24 124 IPR020828 GO:0051287
Dod01g1682 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 187 IPR036291 -
Dod01g1682 354 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 23 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1682 Dod-Chr1 48812004 48816494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1682 K00134 - gmx:100794095 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1682 01 48812004 48816494 Dod01g1682 01 48812004 48816494 ECH