Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1042 ATGGCTCTTTCTTCTCCCAGCGTTTCATCATTTTCTGCGTTTTCTCTCTCAACCATTGTTGGGGATGGCTTGAGAAAGCCAGCTCCTCCTTCTTTGATTAGATTTGCTATCTTTCCAGATCCTTCTTCCCTGAGCTTTTCTAAGAAATGGGGTAGCAGAAATCTTAAGGTTCCTGCATCAACTGCGCCTCTCACTGGGGTGATATTCCAACCATTTGAAGAGATGAAGAAGGATGCTCTTGCTGTTCCAACAACATCCCAAGTTTCATTGGCTCGTCAGCACTATGCTGATGAGTGTGAATCTGCCATTAACGAGCAGATAAATGTGGAGTACAATGTTTCCTATGTGTACCACTCCTTGTTTGCATACTTTGACAGGGACAATGTGGCTCTCAGGGGACTTGCCAAGTTCTTCAAGGAATCTAGTGAAGAAGAAAGAGAACATGCTGAAAAGCTCATGAGGTATCAGAACATTCGTGGTGGAAGAGTTTTACTTCACTCCATCAAGAATGTACCCTCAGAATTCGAGGATGAGGAAAAGGGGGATGCATTGTATGCTATGGAATTAGCCTTGTCTCTGGAAAAGTTAACAAACGAGAAACTTCTGAATTTGTACAGTGTAGCAGATCGCAACAAAGATCCTGAAATGGCTAACTTCATCCAAAACGAGTTTTTGAGTGAGCAGGTGGAAGCAATTAGGAAGATAGCGGAGTATCTGGCGCAATTGAGAAGGGTTGGAAAGGGTCACGGTGTTTGGCATTTTGATCAAAGACTTCTTCATGAGTAA 786 0.4313 MALSSPSVSSFSAFSLSTIVGDGLRKPAPPSLIRFAIFPDPSSLSFSKKWGSRNLKVPASTAPLTGVIFQPFEEMKKDALAVPTTSQVSLARQHYADECESAINEQINVEYNVSYVYHSLFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMRYQNIRGGRVLLHSIKNVPSEFEDEEKGDALYAMELALSLEKLTNEKLLNLYSVADRNKDPEMANFIQNEFLSEQVEAIRKIAEYLAQLRRVGKGHGVWHFDQRLLHE* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1042 261 ProSiteProfiles Ferritin-like diiron domain profile. 93 246 IPR009040 -
Dod01g1042 261 Pfam Ferritin-like domain 101 245 IPR008331 GO:0008199
Dod01g1042 261 SUPERFAMILY Ferritin-like 84 259 IPR009078 -
Dod01g1042 261 PANTHER FERRITIN-1, CHLOROPLASTIC 1 260 - -
Dod01g1042 261 CDD Euk_Ferritin 97 256 - -
Dod01g1042 261 Gene3D - 62 261 IPR012347 -
Dod01g1042 261 PANTHER FERRITIN 1 260 IPR001519 GO:0006826|GO:0006879|GO:0008199
Dod01g1042 261 ProSitePatterns Ferritin iron-binding regions signature 1. 144 162 IPR014034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1042 Dod-Chr1 19490332 19492976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1042 K00522 - gmx:547698 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1042 01 19490332 19492976 Dod01g1042 01 19490332 19492976 ECH
Dod01g1042 01 19490332 19492976 Dod07g1597 07 43285709 43289104 PCT