Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1005 ATGGCTGATTCTAGTGAGTGTGGAGACCACCAGACAACGGCAATAGCCGACGGCGCCGGCGGCGTCTCCGGAATCGTGCGGCGGTGGAAGAGAGAGGACTTGTTCAAGAGAGTGTCGTTGGCACTGAGAGGGGTCGCTCTGCTTTTCTCTCTTATTTCCTTCATTATCACTGCCAGCAACAAACATGGTTACGGGAGAAGCTTTGATCTTTATGAAGAGTATAGGTATCTGTTGGCTATTGCGATCTTGTCCACTCTTTACGCTGGAGGCCAAGCTTTTCTTCAAGTTTGGGAACTCTCCAATGGAAAACAATTGCTTAAGCCCAGATTGGCTGCTATTATTGACTTTTCCGGAGATCAGATCATTGCATATCTTCTGATATCATCAGCATCTTCTGCGGTTCCATTAACAGATAGAATGAGGGAAGGCGGAGACAATATATTTACAGACTCTTCAGGTGCAGCCATTGCCATGTCTATTTTTGCCTTCTTGTGTCTTGCAGTGTCAGCACTCATTTCAGGCTACAAACTATCAACTCAACCTTATATATAA 552 0.4565 MADSSECGDHQTTAIADGAGGVSGIVRRWKREDLFKRVSLALRGVALLFSLISFIITASNKHGYGRSFDLYEEYRYLLAIAILSTLYAGGQAFLQVWELSNGKQLLKPRLAAIIDFSGDQIIAYLLISSASSAVPLTDRMREGGDNIFTDSSGAAIAMSIFAFLCLAVSALISGYKLSTQPYI* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1005 183 Pfam Casparian strip membrane protein domain 35 165 IPR006702 -
Dod01g1005 183 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 14 182 - -
Dod01g1005 183 PANTHER CASP-LIKE PROTEIN 4B1 14 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1005 Dod-Chr1 18861502 18863642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1005 16 143 Miscellaneous Gene Families AT1G79780 25.180 6.92e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1005 - - gmx:100818718 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1005 01 18861502 18863642 Dod07g1630 07 43651456 43653543 PCT