Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1002 ATGCCAATTTCGAGGTTCCACATTCGGAGCGAGCACAGCTTGGCGGATCCGGAGCTCCACCGCGCCGCCGACAAGGATGATCCCGAAGCTGTCCTTGAGGCTGTCGCCATGGCCGGACTCGTTGGCGTCCTCCGCCAGCTCGGCGACCTCTCTCAGTTTGCTGCTGAGATCTTCCATGACTTGCATGAAGAAGTATTGGCCACTGCTGCAAGAGGCCACAGTCTTATTTCTCGTGTTCAACAGCTAGAGGCTGAAGTTCCTGCACTCGAGAAAGCTTTTTTGTCACAAACTTATCATTCATCATTTTTTACAAATGGAGGTATTGACTGGCATCCTAATCTTCGATCTGAACAGAATCTTGTTACTCGTGGAGATTTGCCTCGATTTATAATGGATTCATACGAAGAATGCCGTGGCCCCCCAAGACTATTCCTTCTGGACAAGTTTGATGTGGCTGGGGCTGGAGCATGTCTCAAGCGTTATACTGATCCATCATTCTTCAAAGTCGATTCAACTTCCTCTGTCATGGCAACAGTAGAGATTCACCAGGAAAAAAGAATTCGCAAAGTCAAGCAGAAGAATGTAGCACAACCAAGGAATGGTGAAACCCGTGAAGTTGTATCATCACATGCCAAACTGCATGAGTTGTTTCTTGAGGAGCGTATTGAGAATGCTTGCAGGGATCCTGCACGTCTTGTAAAGTTGAGGAAAAAACAATTGAATGGATATGCAGTTGAATCAAGAACTGGAAAAAGTTACATGGAGAAAATTCTGGAAATTTCCTCTCCTGATCATAAAATGGTTTCTGAAACTTCAGTCACTCCACTCCCTGCGAAATTAATGTCAGATGATGCTAGTGAAAATGAGATTAAAATACTTGAGATCAGTAGTGTTAGTCCTGTGAAAAGGTCATTTGGAAATGAAAGCACACATTCATCACCAAATGAGCAGGAATTAGAACTGAAACCATACTCTGAAATGGATAGGGACACAGATGGAGATATTATGCAGGTGGATGAAGAAGTCTCTGTGAGTGTGACAACTTCCAATCATCCCAAGGTACCTGATGAGACAGAATTGGGAGTTAATGAACAAAAGAAAAGAGAATACAGCTTACATGGCTACCATTCTGATGATGTGGCTAGTGAGGTTGATGATTATCTGGATGCCTTACCTACCATGGAAGAATTGGAAACAGACATTGAACCAAAGAAAGGCTTATTTCATTTCCAAAAGGTAGCTTATTCGAATGGAAAAGAAGAACATCAACTGCAAGCCCAGTTTTCAGATTCTCAATCTTTTGGAGACTCTTTGACATCAGAAGAAATTAGTTCATTCAATGAAGATAGAAAAGGGGAACACACTGAAGGGCAAGCTCCGTTGTTAGATTCTCAATCATCACGAAGCTCCAGTGCATCAGAAGATAACAGATTATCCACAAGAGGCAGAATTGAACATTCCCAAGTGGATGCTCAGTTTTCAGATTCTCAATCCATTGGAAACTCCTCGACTTCAGAGATTGAAAATGTGCCATCCAACCAGCTTTTCCAACCTGTTGAGCAAAATACTCAATTTGGCAAGTTTGTCAAGCATGATGATGATCGTGTTCATGATGAAGAGATTTTTTATGGTAGACCAGTCTCTTCTGGTTCTGGTCTGGTGGATTCAGGATTGTTATCTTCAGATCTTGGGGCCACCTTGTCCCTAGCTACAGGGACTCAATCAGATGAAATACCGTCTGGCCCTGTTGAAATGCATGTAAGGTCAGAAGATGAAGACAGGAAGTCATGCATTGAATCTATGTTTGTCGTACCTGATTTTCTCTCCCTAATAAAAGATGATGCTTGCTATATGGTTTCTTCTGATAACAATTCTTTGAACAACTTGGCTGTTTGTGATCCATGTGTTAATTCCAATGCTTTATCACCAGTTTCTAATGATTTGAACTTAGAACATGGAGATGAATATGGTGATCATTTGATGACCACCAAAGTGTTGCAGGAAGAATCTCCTAATCAACACTCTTCTGAAATTTTGGTAAGTGGTGATATTGGTTCTCAAGGAGAGGATCCAATTTACCCAGCCATGGAAGTAGACCTGAATTCAGGTGCTAAGTTGCCACTTGATGGCCAAGACTTAAAATCTGAGAATGATGTTACAGCAACCCAACATAATTCAGAAGATTTATCGCCTGTTGTGGAGACTCGACCAGTGAGTAGCTTTACAGAGGAGCTATGTTCAGATTTTATTCATGGAAAGCCTCAGGATGAACCAGATTCAGCAGAAGCAGCTGTAGTTTTTTATTCTGATCGGCAATCAAATTTTGATGGGGTACCGAGGATGATTCTTGGTGATGAAATACATGGATCCATAGTTGAAAATGATAGTCATATTAAACATATGTCTTCTCCCAATTATGTTAGGCAGGATGATCATGTCATTGTAAATGATGTGTCAGCAGACCAGGCTTTATCTTCACTTCCTTTGGTTGATAGTGCTGAAAAGGATGCAAGTATTTTTACTTCTCAGGCCTCGGGTTTTGTTTCTTCTCCATCAAGGAACCTTTCAGATTTGCCTGAATCTTTCTCCAGTCCTTCCAATTCTCATCAGACTGAAATAGAATCCAATGAGGCAGAGTTGACTAAGAGTTCCATAGACTTCTCAGAAAAGAGGGAAAATAAACTGGAACCATACTCAGATATCATATCTTCTCCAATGAATAGGCATAAAAAGTTGGCCGAATCTTCTTCTACTTTTGCAGATTCTCATGAGAAAGAGATGGAAGTCAATGAGGCAGTTGCTCAAAAATCTTTGACAGAATTAATGGCACGGAAGGTAATGGATCAACCTGAAATTGCTTCTGATGTAAGGTTGAACTCAAGCAGATCAGTACCCTGTGATCCTTCTGATTCTGAAATATGTAGCAATATGCATGATTCATGTCTTAAGGAGAAAATTCAACAGAAGGTATCAGATCAACCAGAAACTGCTTCTGCTGATGTACAGCCAAATCTGAACAGATCAATGCCCTGTGATCCTTCTGACCCTGAAATATGTAATGATATTCAAGAGGAGAAAATTCAATACAGTTCTGCTGTCAATGACAAGAAAATTGTGCCCTTAACTCCTGACCTTGACTCTCAGAGGTTGGAATCTATATTTATTTGCCAGAATGATGTACAGAACAGCAAAGATAGTTTGTCATCACCTTCCTATAACCAGCTGAAGCTTGAAACACATTTAGAGATGTTCTTTAAATCACCAGTTAGTCAACTGGATGCAGAAGTTCCACCCAGAAATGAAGAACATTATATCTCTGAGGAATGTCAGCTTCAACAGATTCCAGTTTCAAATCAACTGGAACAACAAAGAATTTCTCATGCTTCTTCTGAGTATGCCCCTGAAATGCATCAGGTTCAACCTTCCTCATATGATTCATCACCAAAGTCTTCTTTCCAGGAGACCAACTGCACAAAACATGCCACGGATCCATTGCAACCCCTTCTTCCTGTGGAGAATAATCATGAGGAGATGCCACCCTTGCCCCCTCTACCGCCAGTGCAATGGAGAATGGGCAAGATTCAACATACTTCCCTAGTTTCACAAAGAGAAGAAATAGAAGTAAGTCAAGCTTCATTCCAACCAACACAGCCAGTTGAACCTGATGATAAGTCTCAATTTGGTTTGTCAACGTCTGACAGAGATACCATATTGGTTCAAAATCCATTTTTGCCTGTCATGGCTGTGGAAAGCAATATGCTTCCGTTTTCTTCTGGGTTTTTATCTGGTGTTTCGGAGCATCCTGTTGCCATTCCTTTGCAATTTCCTATCATGTTAAATGAATCAAATGGTCAATATAATTACCTGGTTATGGAGAGAAACCAAAATCAGGACCCTTTCTTAACATTACCTGTGATACCTACGACCAGGCCTCCACATGGATATTTAATTGGTTCAGATGGAGAAATTGTACAGAATTCAAGTCCATGTCCATCAATACCACCCACTGAATGCTCTGTTTCTGGCTCTGATCCCGTCTCTCCACAAGGAAAACCGACTGAATCTCCAACTCAATTAATGGAGAAGACTAGTTTGGAAGTTAAGAATGAACATGGAGAATTGCAGTCAGTGCTACCTACTGAATGTACTGTTTCTGGAGATGATCCCATCTCACCAAAAGAAAATTCGGCTCCTAGACAATTAATGGAAGAGACTAGTTTAGAAGTTGAAACGCTCGAGCAGTCTTCGATTGATCTGGAAAGAAAACAACAGGGAGATCCTTCAATCTCACCCGTGTCACCACCAAGCATAGAATTTGTGCAGCCCAAGGACAGCCCACCGCCTTCAAAGGAGGAAATGGCATCGAAGGGGGAAATGGCATTGTCATTGGATACATCTGCCCAAACACCAGCGTTTGATAGTGAAATGCCAAATGGAAAACCAAAGAATAAGCTTCTTCCCCGGAATCCTTTAATTGATGCTGTTGCTGCTATTGACAAAAGCAGGTTGAGAAAAGTTTCGGATCGGGTTAGGCCTCAGATAGCACCAAAGGTCGATGAAAGAGATTCATTGTTAGAACAGATAAGATCGAAGTCCTTCAACTTGAGGCCTGCTGTGGCTACACGACCCAACATTCAGGGTCCGAGAACGAATTTGAGGGTTGCTGCCATCTTGGAGAAAGCAAATTCAATTCGCCAGGCATTGGCTGGAAGTGATGAAGACGATGATGCAGATGGCTGGAGTGATTCTTGA 4752 0.4167 MPISRFHIRSEHSLADPELHRAADKDDPEAVLEAVAMAGLVGVLRQLGDLSQFAAEIFHDLHEEVLATAARGHSLISRVQQLEAEVPALEKAFLSQTYHSSFFTNGGIDWHPNLRSEQNLVTRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKVDSTSSVMATVEIHQEKRIRKVKQKNVAQPRNGETREVVSSHAKLHELFLEERIENACRDPARLVKLRKKQLNGYAVESRTGKSYMEKILEISSPDHKMVSETSVTPLPAKLMSDDASENEIKILEISSVSPVKRSFGNESTHSSPNEQELELKPYSEMDRDTDGDIMQVDEEVSVSVTTSNHPKVPDETELGVNEQKKREYSLHGYHSDDVASEVDDYLDALPTMEELETDIEPKKGLFHFQKVAYSNGKEEHQLQAQFSDSQSFGDSLTSEEISSFNEDRKGEHTEGQAPLLDSQSSRSSSASEDNRLSTRGRIEHSQVDAQFSDSQSIGNSSTSEIENVPSNQLFQPVEQNTQFGKFVKHDDDRVHDEEIFYGRPVSSGSGLVDSGLLSSDLGATLSLATGTQSDEIPSGPVEMHVRSEDEDRKSCIESMFVVPDFLSLIKDDACYMVSSDNNSLNNLAVCDPCVNSNALSPVSNDLNLEHGDEYGDHLMTTKVLQEESPNQHSSEILVSGDIGSQGEDPIYPAMEVDLNSGAKLPLDGQDLKSENDVTATQHNSEDLSPVVETRPVSSFTEELCSDFIHGKPQDEPDSAEAAVVFYSDRQSNFDGVPRMILGDEIHGSIVENDSHIKHMSSPNYVRQDDHVIVNDVSADQALSSLPLVDSAEKDASIFTSQASGFVSSPSRNLSDLPESFSSPSNSHQTEIESNEAELTKSSIDFSEKRENKLEPYSDIISSPMNRHKKLAESSSTFADSHEKEMEVNEAVAQKSLTELMARKVMDQPEIASDVRLNSSRSVPCDPSDSEICSNMHDSCLKEKIQQKVSDQPETASADVQPNLNRSMPCDPSDPEICNDIQEEKIQYSSAVNDKKIVPLTPDLDSQRLESIFICQNDVQNSKDSLSSPSYNQLKLETHLEMFFKSPVSQLDAEVPPRNEEHYISEECQLQQIPVSNQLEQQRISHASSEYAPEMHQVQPSSYDSSPKSSFQETNCTKHATDPLQPLLPVENNHEEMPPLPPLPPVQWRMGKIQHTSLVSQREEIEVSQASFQPTQPVEPDDKSQFGLSTSDRDTILVQNPFLPVMAVESNMLPFSSGFLSGVSEHPVAIPLQFPIMLNESNGQYNYLVMERNQNQDPFLTLPVIPTTRPPHGYLIGSDGEIVQNSSPCPSIPPTECSVSGSDPVSPQGKPTESPTQLMEKTSLEVKNEHGELQSVLPTECTVSGDDPISPKENSAPRQLMEETSLEVETLEQSSIDLERKQQGDPSISPVSPPSIEFVQPKDSPPPSKEEMASKGEMALSLDTSAQTPAFDSEMPNGKPKNKLLPRNPLIDAVAAIDKSRLRKVSDRVRPQIAPKVDERDSLLEQIRSKSFNLRPAVATRPNIQGPRTNLRVAAILEKANSIRQALAGSDEDDDADGWSDS* 1584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1002 1583 MobiDBLite consensus disorder prediction 1134 1165 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 425 507 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 991 1008 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 1134 1162 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 443 457 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 1323 1363 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 1421 1435 - -
Dod01g1002 1583 Gene3D - 1 90 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 1398 1413 - -
Dod01g1002 1583 ProSiteProfiles WH2 domain profile. 1520 1538 IPR003124 GO:0003779
Dod01g1002 1583 Gene3D - 1493 1582 - -
Dod01g1002 1583 Gene3D - 104 243 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 1207 1230 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 459 477 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 485 507 - -
Dod01g1002 1583 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 878 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 425 442 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 846 880 - -
Dod01g1002 1583 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 883 989 - -
Dod01g1002 1583 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 988 1583 - -
Dod01g1002 1583 Coils Coil 1402 1422 - -
Dod01g1002 1583 MobiDBLite consensus disorder prediction 1323 1487 - -
Dod01g1002 1583 PANTHER WASP-1 1 878 IPR028288 GO:0005856|GO:0030036
Dod01g1002 1583 PANTHER WASP-1 883 989 IPR028288 GO:0005856|GO:0030036
Dod01g1002 1583 PANTHER WASP-1 988 1583 IPR028288 GO:0005856|GO:0030036
Dod01g1002 1583 MobiDBLite consensus disorder prediction 989 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1002 Dod-Chr1 18800606 18809159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1002 - - ahf:112743748 1729.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1002 01 18800606 18809159 Dod01g1002 01 18800606 18809159 ECH
Dod01g1002 01 18800606 18809159 Dod07g1638 07 43716738 43722643 PCT