Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0927 ATGGAGAGAAGAAGGGTTGTGTGTGAGATGTTGGTGGTGGCGGCTTTGGTGACCCTTTTACATGTCTCATTGACTTGTGTTCCAGCTTCCGCATCAGGGACAGCCAAATCTAATAACCATGATGAGGATCTGTTAAGGAGAAACCTTCTTGCTAATGGCCTTGCTAGAACTCCTCCAATGGGATGGAATAGTTGGAATCATTTCAACTGTCAAATTAACGAAAAAATCATCCGGGAAACTGCTGATGCCCTTGTTTCTACTGGCCTTTCCAGGCTTGGATACACCTATGTCAATATAGATGATTGTTGGGCTGAATTAAATCGGGATGCTAAGGGAAATCTTGTAGCAAAGAAATCAACATTTCCTTCTGGCATCAAAGCTCTTGGAGATTATGTTCACAGCAAGGGTCTTAAGCTCGGAATTTATTCAGATGCAGGGTACTTTACTTGTAGCAGACAGATGCCTGGTTCACTTGGTCATGAGTTCCAAGATGCCAAGACTTTTGCATCATGGGGTATTGATTACTTGAAGTATGACAATTGTAACAATGATGGATCAAAGCCCACTGTTAGATACCCTGTTATGACTCGGGCATTAATGAAGGCAGGTCGTCCAATCTTCTTCTCTTTGTGTGAATGGGGTGACTTGCACCCAGCTTTATGGGGTGCTCAAGTGGGAAATAGCTGGAGAACTACTAATGACATCAATGATTCATGGGACAGTATGATTACAAGGGCCGACATGAATGAAGTTTATGCTGAGCTAGCAAAACCTGGTGGTTGGAATGATCCTGACATGCTTGAGGTGGGAAATGGAGGGATGACAAAAGATGAATACATTGTTCACTTCAGTTTATGGGCCATTTCCAAGGCTCCTCTTCTACTTGGCTGCGATGTTCGTAATATGACCAAAGAGACTATGGAGATAGTTGCAAATAAGGAAGTTATTGCAGTTAGCCAAGATTCTCTTGGTGTACAAGCTAAAAAGGTTAGGATGGAAGGCGATCTTGAGATCTGGGCAGGTCCTCTTTCAGGGTACAGAGTAGCTCTTGTCCTTCTTAATAGAGGTCCCCTGCGGAACGCCATCACGGCCAATTGGGACGACATTGGCATTCCCCAGAAAAGTGTTGTCGAAGCAAGAGATGTTTGGGAGCACAAGACGTTGAAGAAACTGTTCGTGGACAGATTGAGTGCGACCGTCGATTCACACGCGTGTAAAATGTACGTGTTGAAGCCAATTGGTTGA 1245 0.4418 MERRRVVCEMLVVAALVTLLHVSLTCVPASASGTAKSNNHDEDLLRRNLLANGLARTPPMGWNSWNHFNCQINEKIIRETADALVSTGLSRLGYTYVNIDDCWAELNRDAKGNLVAKKSTFPSGIKALGDYVHSKGLKLGIYSDAGYFTCSRQMPGSLGHEFQDAKTFASWGIDYLKYDNCNNDGSKPTVRYPVMTRALMKAGRPIFFSLCEWGDLHPALWGAQVGNSWRTTNDINDSWDSMITRADMNEVYAELAKPGGWNDPDMLEVGNGGMTKDEYIVHFSLWAISKAPLLLGCDVRNMTKETMEIVANKEVIAVSQDSLGVQAKKVRMEGDLEIWAGPLSGYRVALVLLNRGPLRNAITANWDDIGIPQKSVVEARDVWEHKTLKKLFVDRLSATVDSHACKMYVLKPIG* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0927 414 Pfam Alpha galactosidase A 57 321 IPR002241 GO:0004553|GO:0005975
Dod01g0927 414 Gene3D Aldolase class I 50 323 IPR013785 -
Dod01g0927 414 SUPERFAMILY (Trans)glycosidases 51 321 IPR017853 -
Dod01g0927 414 PRINTS Glycosyl hydrolase family 27 signature 129 150 IPR002241 GO:0004553|GO:0005975
Dod01g0927 414 PRINTS Glycosyl hydrolase family 27 signature 52 71 IPR002241 GO:0004553|GO:0005975
Dod01g0927 414 PRINTS Glycosyl hydrolase family 27 signature 191 209 IPR002241 GO:0004553|GO:0005975
Dod01g0927 414 PRINTS Glycosyl hydrolase family 27 signature 88 103 IPR002241 GO:0004553|GO:0005975
Dod01g0927 414 PRINTS Glycosyl hydrolase family 27 signature 164 181 IPR002241 GO:0004553|GO:0005975
Dod01g0927 414 PRINTS Glycosyl hydrolase family 27 signature 277 298 IPR002241 GO:0004553|GO:0005975
Dod01g0927 414 PRINTS Glycosyl hydrolase family 27 signature 256 275 IPR002241 GO:0004553|GO:0005975
Dod01g0927 414 Pfam Alpha galactosidase C-terminal beta sandwich domain 333 410 IPR041233 -
Dod01g0927 414 ProSitePatterns Alpha-galactosidase signature. 93 109 IPR000111 GO:0004553|GO:0005975
Dod01g0927 414 Gene3D - 324 413 IPR013780 -
Dod01g0927 414 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 12 413 IPR002241 GO:0004553|GO:0005975
Dod01g0927 414 PANTHER ALPHA-GALACTOSIDASE 12 413 - -
Dod01g0927 414 CDD GH27 58 321 IPR002241 GO:0004553|GO:0005975
Dod01g0927 414 SUPERFAMILY Glycosyl hydrolase domain 316 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0927 Dod-Chr1 17107041 17111144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0927 45 410 Glycoside Hydrolase AT5G08370 66.120 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0927 K07407 - gmx:100804290 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0927 01 17107041 17111144 Dod07g2233 07 54079596 54091556 PCT