Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0604 ATGGGTTGCTTCTCGTGTTTCGATTCGAGGGAAGATGAGAAGCTGAACCCTCATCCTGACCAGGGTCATCATCCTGACGATCATCGCAAGCACCCACCCAATCAGACCATCCCTTCTCATATCTCCAGATTGCCCTCTGGAGCAGATAAGTTAAGGTCCAGGAGTAGTAATGGTGGTTCCAAGAGGGAGCTGCCTGTTCCAAAGGATGGGCCAGGTGTCCAAATTGCTGCTCAAACTTTTACCTTCCGCGAGCTTGCAGCCGCGACTAAGAATTTTAGGCCGGAGTCCTTTATAGGGGAAGGTGGTTTCGGAAGGGTGTACAAAGGGAAGCTGGAAAGCATGGGTCAGATTGTTGCTGTCAAACAGTTAGACAGAAATGGTCTTCAGGGTAATCGCGAGTTCCTTGTGGAGGTTCTCATGCTTAGTCTTCTACATCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGTGACCAACGCCTCCTTGTTTATGAATTTATGCCATTGGGATCATTGGAGGACCACCTTCACGATCTTCCCCCTGACAAAGAACCATTAGATTGGAACACTAGGATGAAAATAGCTGCCGGTGCTGCAAAAGGATTAGAATACCTGCATGACAAGGCAAATCCTCCTGTCATTTATAGGGACTTCAAGTCATCTAATATATTACTTGATGAAGGATTCCATCCGAAGCTTTCCGACTTTGGTCTTGCAAAGCTAGGTCCTGTGGGTGACAAGTCTCACGTTTCTACCCGTGTGATGGGGACTTATGGCTACTGTGCTCCCGAGTATGCTATGACTGGACAACTGACCGTGAAGTCTGATGTGTATAGTTTTGGGGTGGTATTCTTAGAGCTGATTACTGGCCGTAAAGCAATTGACAGCACCCAGCCTCATGGAGAACAAAACCTTGTCACATGGGCACGTCCACTGTTCAATGACCGCAGGAAGTTTGCAAAGCTGGCTGATCCGAAGCTGCAGGGGCGGTTTCCTATGCGGGGCCTTTACCAGGCTCTAGCTGTGGCATCAATGTGCATCCAAGAATCCGCTGCCACACGTCCTCTGATTGGGGATGTCGTGACAGCCCTCTCATATCTGGCCAACCAGGCGTATGACCCCAATAATGCTGGGCATGTTTATAGGGGATCTGGTGAAGAGAAAAGGAGCAGAGATGATAAAGGTGCAAGAATATTGAAAAATGATGAAGCCGGTGGATCTGGGCGCAGATGGGACTTGGAAGGATCCGAGAAAGATGACTCGCCCAGAGAAACTGCAAGGATGTTGAACAGAGATCTTGATAGAGAACGTGCTGTGGCCGAAGCCAAGATGTGGGGGGAGAACTGGAGAGAAAAAAGAAGGCAGAGTCTGCAACCGGGAAGTTTCGATGCTTCTAATGCTTAG 1410 0.4887 MGCFSCFDSREDEKLNPHPDQGHHPDDHRKHPPNQTIPSHISRLPSGADKLRSRSSNGGSKRELPVPKDGPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGKLESMGQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFAKLADPKLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPNNAGHVYRGSGEEKRSRDDKGARILKNDEAGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSLQPGSFDASNA* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0604 469 MobiDBLite consensus disorder prediction 1 72 - -
Dod01g0604 469 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0604 469 PANTHER OS07G0668900 PROTEIN 1 461 - -
Dod01g0604 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Dod01g0604 469 MobiDBLite consensus disorder prediction 384 434 - -
Dod01g0604 469 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Dod01g0604 469 MobiDBLite consensus disorder prediction 7 34 - -
Dod01g0604 469 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 461 - -
Dod01g0604 469 CDD STKc_IRAK 98 366 - -
Dod01g0604 469 Gene3D Phosphorylase Kinase; domain 1 68 168 - -
Dod01g0604 469 Pfam Protein kinase domain 95 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0604 469 SUPERFAMILY Protein kinase-like (PK-like) 78 373 IPR011009 -
Dod01g0604 469 MobiDBLite consensus disorder prediction 379 434 - -
Dod01g0604 469 Gene3D Transferase(Phosphotransferase) domain 1 169 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0604 Dod-Chr1 10675471 10680421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0604 1 369 Glycoside Hydrolase AT3G07070 64.362 1.11e-171 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod01g0604 Pkinase 6.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0604 K13430 - pvy:116140735 819.69