Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1554 ATGAGGGTGGTGATTTCTCGGATGATGTTGTCAAAAGTAGAAGCTGGTAAGAAGGCTGGCGAAAGTTCAGGAGATGGGAGGTTGTTAAAAGAGATTGAAACTATAAGCAAAGCTCTGTATTTGGATAAGAGATTTTCGAGGAATCCACTTTCTACTGCTAATTCTCGATCGAAATCTGCTGGGAAACCCCACTTACCTGATCCCAAATCGAAGCCTACATCTAGTAATGAAGATCCTTCACGCAAGGATAAGAGGTCTATATGGAATTGGAGGCCATTAAAGGCCTTTTCCCACATCCGCAATCGAAGGTTTAATTGTTGTTTTTCTCTTCAAGTCCATTTGATTGAAAAGTTTCCTTCAACTTTCAATGATGCTAGCCTCCGTGTATACTGGAAGAGGCGGGATGGGGTTTTGGTGACCCGTCCAGCCAAGGTAGTTCAAGGAGTAGCTGAATTTGAAGAGAAGTTGACTTACACTTGCTCAGTGTACGGCAGTAGAAATGGACCTCACCATTCAGCTAAATATGAAGCTAAACATTTTCTACTCTATGCTTCTATTCTTAGTGCACCAGAGCTCGATTTGGGGAAGCATCGGGTGGACCTCACAAGGTTGCTTCCTCTTACGCTGGAAGAACTTGAGGAGGAGAAGAGCTCAGGGAAGTGGACTACAAGTTTTAGATTATCAGGAATGGCCAGGGGTGCTGTAATGAATGTGAGTTTTGGGTACATGGTGGTTGGTGATAATAAAAATGCTACCAGGGACAACCATAATGTTCCTAATGCATTGACTTCAAGGCAAGTTGGAAGTGTGCCAAGCTTTACCAAACAGTATTCTCCTCAAACTATAGACGAGGTAAAGGATCTTCATGAGGTTTTGCCATCATCAAAGTCAGGACTGGCCAGCTCGATAGACATCTTATATCAGAAATTTGAAGAAGAAAGGACAAATAGTCCTGTGCATGACAAACCGATATGTGATTTGTCTATGGAGAATCCCGAGCAAATCGAACCAAATGTGTGTCCTTTATCTGATCCTGGAAAGAAAATATCTGAAGAGTGTGTTGATGATGAAGAAAAGAAGTGCAGTCCAGTGCCTGACAATCCAGAATCTAACTTGTTTCAAGAAAACCTGGAGCCAGTCCAATCTGATGGCTATCCTCTATCTGATTTAAATGAAAACCCTGAAGAGTGTGAAGGTAAGTTTTCTGTTGTTGATCAGGGCATAGAATTGTCTTCGAACAAACCTCTTAACTTGGAGGCATCCACCACAAAGGCTTCTGATTCTGGTGTTGATAGTACCAATACTTGTGATACTGCTGGTATACAGTTATCTTCTGAATATAGTGTTGAATTTAATTCCCTGGATGCGGAAAATGATACTTCTAGGGAAAAGGCTATGGTGAACGAATTCACTTCTGAAGAGGATGGCGAATTCACCAAGGAGCTGCTCATGCAAGAGCTGGAATTAGCTTTAAATAATGTCTCAGATTTGGAGACAGTAGCACTGGAATCTCCCAAAGATGAGAAATATATGGAAGCCAAATCTGAATATAAAATGAGAAAATCACATAGCTTGGATGATATTACAGAATCAGTTGCCAATGAATTTTTAAGCATGCTAGGCGAAGACCATAGTCCATTTGGCTTGAGTTCTGAAAGCGAAGCTGAGTCCCCAAGAGAGCGCCTTTTAAGACAATTTGAAAAGGAGGCTCTGGCTGAAGGGTTCTCTTTATTTGATTTTGAAGTAGGCGACGATGATGAAGCTGAAGGCAGCTATAATGCTCCTGTTGGATCTGAACAGTGGAACTTCTCTGAGGGCCCCGGGTCATCATCCTCGTTTCAAGATCTGCTGCAGGAGGGGCAACAAGTTGAATCTCAGGATGTGAGGAGCAAGCAGAGCGCTCAGATGGTAGAAGACTTGGAAACAGAAGCCTTAATGCGTCAGTGGGGTTTGAATGAGGATGCTTTTAAGCATTCTCCACCAAAAGATCCTGCTGGTTTTGGAAGTCCCATCCACTTATCCCCTGAAGAGCCTCCTAGTTTGCCTCCTCTTGCAGAGGGGTTAGGTCCTTTTCTTCAGACAAAGGATGGGGGATTTTTACGAACTATGGATCCCTCACTTTTCAGGAATGCTAAAAGTGGTGGGAGCTTGATTATGCAAGTTTCCAATCCTGTTGTGGTACCTGCTGAAATTGGTTCTGGTATAATGGAGATTTTGCAGCGATTGGCTTCATTGGGAATTGAAAAGCTCTCAATGCAGGCAAATAAGTTAATGCCTCTTGAGGATATCACAGGGAAGACAATGCAACAAGTGGCATGGGAAGCTATGCCTCTCCTAGAGGGAACAGAGAGGCAAGGTCTGTTGCAGCATGATTTAGTGGAAGGGCAAGACAATGCTTGCATGCAAAGGGGCTTGAAAGGAGCATCGTCTGGACCAAAGGCTACTAAGTTGAGTAAAAATGCGGAAGGCAATCTGACGAGCTCAGAATTTGCTTCATTGGAAGATCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTCTCAGTGGAGGGTCTGAGAATACAATCTGGGATGTCAGATCAGGATGCACCATCAAACATCATTACACAATCCATTGGGGACGTTTCAGCTCTCCAGGGCAAGGGGGCTAATATTAGTGGGTCCCTTGGCCTGGATGGAGCTGCAGGTTTGCAGTTATTGGATATAAAAGACAGCAGTGATGGTGTTGAATCTGTTGATGGGATAATGGGGCTATCATTGACTCTGAATGAATGGATGAGGTTGGATTCTGGCGAGATTGATGATATAGAAAATATCAGTGATCACACTTCTAAAATTCTTGCTGCCCATCATGCTAACTCTTTTGACTTTATTCGTGGGACTTCTAAGGGAGAGAAAAAAAGAGGCAAAGGCCATGGCAGAAAATGTGGTTTGTTGGGAAATAATTTTACAGTAGCATTAATGGTGCAACTTCGTGATCCTCTGAGAGACTATGAGCCTGTTGGATCACCGATGCTTGCTCTCATACAAGTTGAGAGGGTGTTCATCCCACCAAAGCCAAAAATTTACTGTAATGTGTCTGAGATAAGGAACAATAATGACAAAGATGATGAGTGTGAAACTAAAGCAAAGTTGGAGTCGAAAGATGACAAGAAAGAAGAGAAAGCTTCTGAAGAGGAGGGCATTGCTCAGTTCAGAATTACTGAAGTCCATGTCGCTGGTCTAAAGACTGAGCCTCGCAAAAAGAAGCTTTGGGGTACTTCAGCCAATGAAAAATCGGGTTCTCGGTGGTTGCTTGCTAATGGAATGGGGAAGAGCAACAAGCATCCAATAATCAAGTCAAAGGCTGCATCTAAATCTGGCGCTTTGGCTACAGCAAAAGTGCAACCTGGTGATACATTGTGGAGCATATCGTCACGTGTTTATGGTACTGGAACAAAATGGAAGGAATTGGCAACTCTAAATCCACATATAAGAAACCCCAACGTCATTATACCAGATGAAACCATTAGATTGAAGTGA 3522 0.4299 MRVVISRMMLSKVEAGKKAGESSGDGRLLKEIETISKALYLDKRFSRNPLSTANSRSKSAGKPHLPDPKSKPTSSNEDPSRKDKRSIWNWRPLKAFSHIRNRRFNCCFSLQVHLIEKFPSTFNDASLRVYWKRRDGVLVTRPAKVVQGVAEFEEKLTYTCSVYGSRNGPHHSAKYEAKHFLLYASILSAPELDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLSGMARGAVMNVSFGYMVVGDNKNATRDNHNVPNALTSRQVGSVPSFTKQYSPQTIDEVKDLHEVLPSSKSGLASSIDILYQKFEEERTNSPVHDKPICDLSMENPEQIEPNVCPLSDPGKKISEECVDDEEKKCSPVPDNPESNLFQENLEPVQSDGYPLSDLNENPEECEGKFSVVDQGIELSSNKPLNLEASTTKASDSGVDSTNTCDTAGIQLSSEYSVEFNSLDAENDTSREKAMVNEFTSEEDGEFTKELLMQELELALNNVSDLETVALESPKDEKYMEAKSEYKMRKSHSLDDITESVANEFLSMLGEDHSPFGLSSESEAESPRERLLRQFEKEALAEGFSLFDFEVGDDDEAEGSYNAPVGSEQWNFSEGPGSSSSFQDLLQEGQQVESQDVRSKQSAQMVEDLETEALMRQWGLNEDAFKHSPPKDPAGFGSPIHLSPEEPPSLPPLAEGLGPFLQTKDGGFLRTMDPSLFRNAKSGGSLIMQVSNPVVVPAEIGSGIMEILQRLASLGIEKLSMQANKLMPLEDITGKTMQQVAWEAMPLLEGTERQGLLQHDLVEGQDNACMQRGLKGASSGPKATKLSKNAEGNLTSSEFASLEDLAPLAMDKIEALSVEGLRIQSGMSDQDAPSNIITQSIGDVSALQGKGANISGSLGLDGAAGLQLLDIKDSSDGVESVDGIMGLSLTLNEWMRLDSGEIDDIENISDHTSKILAAHHANSFDFIRGTSKGEKKRGKGHGRKCGLLGNNFTVALMVQLRDPLRDYEPVGSPMLALIQVERVFIPPKPKIYCNVSEIRNNNDKDDECETKAKLESKDDKKEEKASEEEGIAQFRITEVHVAGLKTEPRKKKLWGTSANEKSGSRWLLANGMGKSNKHPIIKSKAASKSGALATAKVQPGDTLWSISSRVYGTGTKWKELATLNPHIRNPNVIIPDETIRLK 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1554 1173 MobiDBLite consensus disorder prediction 595 613 - -
Dere14g1554 1173 ProSiteProfiles LysM domain profile. 1124 1172 IPR018392 -
Dere14g1554 1173 SMART LysM_2 1125 1173 IPR018392 -
Dere14g1554 1173 ProSiteProfiles C2 NT-type domain profile. 96 244 IPR019448 -
Dere14g1554 1173 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 9 1167 IPR039614 -
Dere14g1554 1173 MobiDBLite consensus disorder prediction 1033 1060 - -
Dere14g1554 1173 Pfam LysM domain 1127 1172 IPR018392 -
Dere14g1554 1173 SUPERFAMILY LysM domain 1125 1172 IPR036779 -
Dere14g1554 1173 CDD LysM 1127 1172 IPR018392 -
Dere14g1554 1173 MobiDBLite consensus disorder prediction 49 83 - -
Dere14g1554 1173 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 101 247 IPR019448 -
Dere14g1554 1173 Gene3D LysM domain 1124 1171 IPR036779 -
Dere14g1554 1173 Coils Coil 480 500 - -
Dere14g1554 1173 MobiDBLite consensus disorder prediction 586 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1554 Dere-ChrDere14 17005042 17008908 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1554 14 17005042 17008908 Dere14g1554 14 17005042 17008908 ECH