Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1547 ATGGGGGAAGAAGCAGGGGTGGGTGCTACTGAAGCGAACAGGCTTCATCATCGTCATCAAAATGGAAGCATCGATGGTCGGAGCCTTGAATTTGACATATACCCTTTGAGCGGCTACTACTTTGGCTCCAAAGATGCCATTCCCTTCAAAGACGAGACCTTAGCTGATCGTGTTCAGAGGATGAAATCTAACTATGCTGCTCATGGACTACGAACTTGTGTGGAAGCGGTCATACTGGTTGAGTTGTTCAAACATCCACATTTGTTGCTGTTGCAAGTAAGAAATTCCATCTATAAACTCCCTGGTGGCCGCCTAAGACCAGGTGAATCAGATATCGATGGATTAAAACGTAAGCTGGCAAGGAAGCTTTCTGTTGATGAACATGGGGATGGAACTGGATGGGAGGTGGGTGAATGCCTTGGAATGTGGTGGAGGCCTGACTTTGAAACCTTACTGTATCCCTACTTGCCACCTAATGTGAAAAGTCCGAAGGAGTGTACGAAACTCTTCCTTGTCAAGCTACCAGAGTCTCGGAAGTTCATTGTGCCTAAAAATCAAAGGTTGCTTGCTGTCCCGTTGTGCCAAGTTCATGAAAATCACAAGACGTATGGCACAATTATATCAGGGGTCCCGCAGCTGCTCTCAAAGTTCTCTTTCAACATTATCCAGTCTTAA 675 0.4593 MGEEAGVGATEANRLHHRHQNGSIDGRSLEFDIYPLSGYYFGSKDAIPFKDETLADRVQRMKSNYAAHGLRTCVEAVILVELFKHPHLLLLQVRNSIYKLPGGRLRPGESDIDGLKRKLARKLSVDEHGDGTGWEVGECLGMWWRPDFETLLYPYLPPNVKSPKECTKLFLVKLPESRKFIVPKNQRLLAVPLCQVHENHKTYGTIISGVPQLLSKFSFNIIQS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1547 224 ProSiteProfiles Nudix hydrolase domain profile. 69 195 IPR000086 -
Dere14g1547 224 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 29 223 IPR016706 GO:0003729|GO:0005849|GO:0006378
Dere14g1547 224 MobiDBLite consensus disorder prediction 1 21 - -
Dere14g1547 224 Pfam Nucleotide hydrolase 31 217 IPR016706 GO:0003729|GO:0005849|GO:0006378
Dere14g1547 224 SUPERFAMILY Nudix 74 179 IPR015797 -
Dere14g1547 224 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 30 221 - -
Dere14g1547 224 FunFam Pre-mRNA cleavage factor Im subunit 2 29 221 - -
Dere14g1547 224 PIRSF CPSF-25 7 224 IPR016706 GO:0003729|GO:0005849|GO:0006378
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1547 Dere-ChrDere14 16895579 16899197 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1547 14 16895579 16899197 Dere14g1547 14 16895579 16899197 ECH