Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1499 ATGTCGAGGCTGCTTCGGAACACTTTTCTTCTTAAGCGCTCTCTTTTCCGCCACGATGTCACTCCAGTGGCATTTGAACGAGGAATATTGTGCACATCTCAATTTTTAACCTTTTCAACTAGAGGTAAAAGGGGTTCAAAATCAGATGGAAGTGATTCAAGTGAAGAAAACATGTCCAAGAAAGAGTTGGCCCTACAACAAGCTCTGGATCAGATCTCTTCTGCATATGGAAAGGGATCTATCATGTGGCTTGGTCGCTCTGCCTTTCCAAAACATGTACCTGTAGTGTCAACTGGTTCTTTTGCTCTTGATATAGCTCTAGGAGTAGGTGGACTTCCAAAGGGACGTGTTGTGGAAATATATGGTCCAGAGGCTTCTGGGAAAACTACCCTTGCTTTACATGTAATTGCAGAAGCACAGAAGCAAGGAGGCTATTGTGCTTTTATTGATGCTGAACATTCACTTGATAAAGCACTTGCGGAGTCTATTGGTGTTAATACTCAGAACTTGCTTCTCTCTCAACCTGATTGTGGTGAACAAGCACTTGGTCTTGTTGATACCTTAATCCGGAGTGGTTCAGTTGATGTAATTGTTGTTGATAGCGTAGCTGCTCTTGTTCCTAAAGGTGAGCTTGATGGTGAGATGGGTGATGCTCACATGGCAATGCAGGCCAGGTTGATGAGCCAGGCACTTCGAAAATTGTGCCACTCTTTGTCAACATCACATTGTGTATTGATTTTTATAAACCAGGTGAGGTCAAAGCTTTCCACTTTTGGAGGGTTTGGTGGGCCAACTGATGTCACTTGTGGTGGTAATGCACTGAAATTCTATGCTTCAGTGCGGCTAAATATCAAACGAATAGCATTTGTTAAGAAGGGAGAAGAGACGTTAGGAAGCCAGGTTCTTGTCAAGGTTGTGAAGAACAAGCTTGCCCCTCCATTTAAAGCTGCACAGTTTGAGCTTGAGTTTGGCAAGGGTATATGTAAAGAAGCAGAGATCTTAGATTTGAGCCTAAAACACAAATTCATCTCAAAGTCTGGTTCATTTTACAACTACAAGGGTCAGAATTTCCATGGTAAGGATGCTCTTAAGAAGTTCCTGGCTGGCAATTACACTGCTCAAGAAGAACTTATCCTGAAGCTCAGGGAGAAGCTTATTAATGCTGAGACAGAAGCAGATGTAACAGATGGAGATGCTACAGAAGTTGTATCACGTGATTCTACTGATGAAGAAGTAGCTGCTGCTGCAGAAGCATGA 1257 0.428 MSRLLRNTFLLKRSLFRHDVTPVAFERGILCTSQFLTFSTRGKRGSKSDGSDSSEENMSKKELALQQALDQISSAYGKGSIMWLGRSAFPKHVPVVSTGSFALDIALGVGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCAFIDAEHSLDKALAESIGVNTQNLLLSQPDCGEQALGLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSTSHCVLIFINQVRSKLSTFGGFGGPTDVTCGGNALKFYASVRLNIKRIAFVKKGEETLGSQVLVKVVKNKLAPPFKAAQFELEFGKGICKEAEILDLSLKHKFISKSGSFYNYKGQNFHGKDALKKFLAGNYTAQEELILKLREKLINAETEADVTDGDATEVVSRDSTDEEVAAAAEA 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1499 418 NCBIfam recombinase RecA 61 382 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere14g1499 418 Gene3D - 91 397 IPR027417 -
Dere14g1499 418 PRINTS RecA protein signature 150 179 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere14g1499 418 PRINTS RecA protein signature 184 213 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere14g1499 418 PRINTS RecA protein signature 222 251 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere14g1499 418 PRINTS RecA protein signature 303 332 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere14g1499 418 PRINTS RecA protein signature 270 298 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere14g1499 418 MobiDBLite consensus disorder prediction 45 59 - -
Dere14g1499 418 MobiDBLite consensus disorder prediction 41 60 - -
Dere14g1499 418 Coils Coil 371 391 - -
Dere14g1499 418 FunFam Recombinase RecA 90 390 - -
Dere14g1499 418 PANTHER RECA 38 394 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere14g1499 418 SUPERFAMILY RecA protein, C-terminal domain 329 384 IPR023400 -
Dere14g1499 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 327 IPR027417 -
Dere14g1499 418 ProSiteProfiles RecA family profile 1. 92 251 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Dere14g1499 418 Hamap Protein RecA [recA]. 61 388 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere14g1499 418 MobiDBLite consensus disorder prediction 397 418 - -
Dere14g1499 418 CDD RecA 92 329 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere14g1499 418 Pfam recA bacterial DNA recombination protein 64 327 IPR013765 GO:0003697|GO:0005524|GO:0006281
Dere14g1499 418 ProSitePatterns recA signature. 273 281 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Dere14g1499 418 SMART AAA_5 114 288 IPR003593 GO:0016887
Dere14g1499 418 ProSiteProfiles RecA family profile 2. 261 332 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Dere14g1499 418 MobiDBLite consensus disorder prediction 398 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1499 Dere-ChrDere14 16048408 16054931 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1499 14 16048408 16054931 Dere14g1499 14 16048408 16054931 ECH