Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1465 ATGATGTATGAAAGGCAAGGAGTAGTTGATCATCATCATCAGGGAACGCTGAGGATGGATGTGACGAAGAAGAAAAGTGATAACAATCAGAGAAAACCAAAGAGAGGGATCACAGAGGAAGATGAAAGGCTTGAGATTGTTGATCTGAGTGGAATGGCCTTGGACTCTCTTCCCAATCCTTCTCTTAATTTGGCTTCTATTTCCAAGTTGGACCTCTCCAACAACAATCTTCAGAATATTCCAGAGTCATTAACGGCGAGATTGCTGAACGTGGTGGCACTGGACGTGCACTCTAATCAACTAAGGTCTCTCCCAAACTCCATAGGCTGCCTCTCAAAGCTCAAGTTCTTGAATGTCTCTGGCAATCTCATTGAATCCTTCCCCAAAACCATTGAAAATTGCAGAGCTTTAGAAGAACTGAATGCCAACTTCAACAAGCTAAGCAAGCTGCCAGAAACCATAGGGTTTGAACTCATCAATCTAAAGAAACTATCGGTGAACTCCAACAAGCTTGTGTTTCTTCCTCACTCCACCTCCCACCTCACATCTCTTCGTGTTCTCGATGCTCGCCTGAATTGCCTTCGAGCACTACCAGATGACCTCGAGAATCTGATCAACCTGAAAACCCTAAATGTGAGCCAAAACTTCCAATACCTAGAAACCCTACCTTACTCAATAGGGCTTCTCTTGTCCCTTGAAGAACTAGACGTCAGCTACAACAGAATCAAGTCCTTGCCGGACTCCATTGGCTGTCTCAAGAAGTTGCAGAAGCTAAGTGTGGAAGGGAACCCTTTAAGGTCGCCTCCTAAGGAGGTGGTGGAGCAAGGAGTGGATGCAGTGAAGGAGTATTTGTGCCAGAAGATGATCTCAGGGCATCGGAGCCCGACCAAGAAGAAGTCTTGGATGCGGAAGTTGGTTAAATATGGTACCTTCAGTGGTTCACGCACCAGAAGTGGGCACCGAGAAGATCACGAGGATTTTGCCACCGTGCCAGAGCATCGTTCCATAGGAGGTACTGCTTCACCGAGGTTGATGGGCATGTTCTCCCCAAGCCGTCTCTTCTCCCCTCGTAGGTCCTTCAGCAATTGA 1089 0.4692 MMYERQGVVDHHHQGTLRMDVTKKKSDNNQRKPKRGITEEDERLEIVDLSGMALDSLPNPSLNLASISKLDLSNNNLQNIPESLTARLLNVVALDVHSNQLRSLPNSIGCLSKLKFLNVSGNLIESFPKTIENCRALEELNANFNKLSKLPETIGFELINLKKLSVNSNKLVFLPHSTSHLTSLRVLDARLNCLRALPDDLENLINLKTLNVSQNFQYLETLPYSIGLLLSLEELDVSYNRIKSLPDSIGCLKKLQKLSVEGNPLRSPPKEVVEQGVDAVKEYLCQKMISGHRSPTKKKSWMRKLVKYGTFSGSRTRSGHREDHEDFATVPEHRSIGGTASPRLMGMFSPSRLFSPRRSFSN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1465 362 SMART LRR_typ_2 88 110 IPR003591 -
Dere14g1465 362 SMART LRR_typ_2 252 275 IPR003591 -
Dere14g1465 362 SMART LRR_typ_2 158 180 IPR003591 -
Dere14g1465 362 SMART LRR_typ_2 229 251 IPR003591 -
Dere14g1465 362 SMART LRR_typ_2 64 87 IPR003591 -
Dere14g1465 362 SMART LRR_typ_2 135 157 IPR003591 -
Dere14g1465 362 SMART LRR_typ_2 181 204 IPR003591 -
Dere14g1465 362 SMART LRR_typ_2 111 134 IPR003591 -
Dere14g1465 362 PANTHER - 43 126 - -
Dere14g1465 362 ProSiteProfiles Leucine-rich repeat profile. 66 87 IPR001611 GO:0005515
Dere14g1465 362 Pfam Leucine rich repeat 206 265 IPR001611 GO:0005515
Dere14g1465 362 Pfam Leucine rich repeat 67 124 IPR001611 GO:0005515
Dere14g1465 362 ProSiteProfiles Leucine-rich repeat profile. 231 252 IPR001611 GO:0005515
Dere14g1465 362 SUPERFAMILY L domain-like 43 269 - -
Dere14g1465 362 Gene3D Ribonuclease Inhibitor 4 219 IPR032675 -
Dere14g1465 362 PRINTS Leucine-rich repeat signature 229 242 - -
Dere14g1465 362 PRINTS Leucine-rich repeat signature 67 80 - -
Dere14g1465 362 MobiDBLite consensus disorder prediction 1 39 - -
Dere14g1465 362 Gene3D Ribonuclease Inhibitor 220 278 IPR032675 -
Dere14g1465 362 SMART LRR_bac_2 88 107 - -
Dere14g1465 362 SMART LRR_bac_2 229 248 - -
Dere14g1465 362 SMART LRR_bac_2 158 177 - -
Dere14g1465 362 SMART LRR_bac_2 204 225 - -
Dere14g1465 362 SMART LRR_bac_2 134 153 - -
Dere14g1465 362 SMART LRR_bac_2 111 130 - -
Dere14g1465 362 SMART LRR_bac_2 64 83 - -
Dere14g1465 362 SMART LRR_bac_2 181 200 - -
Dere14g1465 362 SMART LRR_bac_2 252 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1465 Dere-ChrDere14 15633339 15638824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1465 63 266 Receptor kinase-like Gene Family AT4G04220 28.700 1.99e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1465 14 15633339 15638824 Dere14g1465 14 15633339 15638824 ECH