Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1456 ATGCGCTCAGGAGGTTGTGCATTACAGCAGACCCTCACATCGGAGGCTGCTTCTGTGTTGAAGCATTCTCTGGGCTTGGCTCGCAGGAGGGGCCATGCCCAGGTCACTCCTCTCCACGTGGCAGCCACCTTACTCAGCCTTAGAGCCAGTTCCTTCAGAAGGGCTTGTCTGAAATCTCACCCTCATCACCAAACTTCTTCACATTCACATCATCCTCTCCAATGCAGAGCCCTTGAACTCTGCTTCAATGTGGCTCTCAATAGGCTCCCAACCACACCAACCCCAAATCTACTTCACACCCAGCAGCCTTCTCTTTCAAATGCTCTGATTGCTGCTCTCAAAAGAGCACAGGCTCACCAGCGAAGGGGTTGCATAGAACAACAGAATCAGCAGCCACTTTTGACCATAAAGGTAGAGCTTGAACAGCTTGTTATATCTATTCTTGATGACCCTAGTGTTAGTAGGGTTATGAGAGAGGCTGGGTTCTCTAGTACTGCTGTGAAGAGCAGTATAGAGGACTCTTCAGTTTCACCCCCTTGTTCTGTTTTCCAGTGTTACAGCACTTCTGGTGGTGTCTTTTCTTCTCCATGCTCTCCTTCTCCTAGTGAAAACCAGAGAGAAACCATCAATTCCAACAATTTCAGGCACACCCATTTCTACACTTCTTCTGAGTACTACAACCCAGTTCTTTTCTCTCCTCAAAAGAGAACACCAGTGTACCCCATCAGTGAATCAGCTTCATCTAAGGAAGATATCAAGTTGGTTTTAGATGTGCTCTTGAGGAAGAAGAAGAAGAACACTGTGATAGTTGGGGACTCACTCTCCATCACTGAAGGCCTTGTGGCAGAACTGATGGGAAGATTTGACAGAGGAGAGGTTCCAGATGAGTTGAAGTCAACCCGTTTCATCAAGTTCCATTTAGTTCCAGTTTCCTTCAGGTTTATGAAGAGAGATGAAGTTGAAATGAATCTCTTGGAGCTTAAAAGAAAGGTGGATTCTATTGCATCAGGAGGAGGAGAGGGTGCCATTTTTTACATTGGAGACCTTAATTGGACAGGGGAGGCAACTTTCTTCAGTGAAAAGGATGGAGGAGAAGTCTCTGGTTATAATCCAGTGGATCATCTAGTTGCAGAAATAGGAAAGTTGTTCTCTGACCATGGAAGCACACCAAACGCTAAAATATGGCTGATGACCACTGCAAGTTACCAAACATACATGAAGTGTCAAATGAGGCAGCCCCCTCTTGAGACTCAGTGGTCTCTTCAAGCAGTTATTGTTCCTTCAGGTGGACTTGGCTTGAGCCTCCATGCTTCGAGTGTTCTTGATTCAAAGATGACCATCTCCCAGAATGCATCTCATATGCTGGAAAAGAAGCTCTTCAGTAACAGCGAGGAGCAAGATAGGCTCACTTGCTGTGAAGAATGTGCCTCTAACTATGAAAAAGAAGCTCAATTATTCAAACCAGGCCAGCCCAAACTCTTGCCTTCCTGGCTTCAGTCCCATAGCATTGAAGCCCATCAGAAGGAAGAATTGACCCAGTTGAGAAGAAAATGGAATAGACTGTGCCACTATCTGCACCAAAGTAAGCATTCTCACAACCATTGGAATAACAGTCTACACAGCAATCACAGTTCAAATGGGAAGATTTATCCCTATAATTCTTCATATCCCTTGTGGCCAAAGCAAGGTAGTATCTTCCCAGATTCAAGTTCTATATCATTTGCAGACTCTGCTACTAAACCCACCCATAGCTCCAATCTTGTACCTCGATTCCGACGCCAACAATCATGCACTATTGAGTTCAATTTCAGCAATGGAACTCAGAAACAGCTGCAAGCAACAGAAGAGCCAAGCTTGAATTCTCTTAAGGGCATGGAAGGTAAAGAAGTAAAGATTACTCTTGCTCTTGGGAATTCCCCATTCGGTGGTTCAGAGCAAAGGGAGGAAAGTATAACTGATACAACACAGCGAAGAGCTTATGTTTGTAAACTATTGCAGGAGAATGTGCCATGGCAGTCTGAAACAATCCCTTCAATAGCAGAGGCCTTGGTTGTTGATTCCAAATCACAAAAGCAAAACACAACTTGGTTAATTTTGCAGGGCAATGACTCTACAGGAAAAAAAAGGTTGGCTCATGCAGTTGCGGAATCGCTTTTTGGCTCAGCTGATCTGATTTTTCACTTGGACATGAAGAAAAAGGAGACCTTAGCATCTTCATTCTGTGAAATGCTGACAAGAGCGTTGAAAGCCCATGAAAAACTCGTCGTCTTAATTGAAAACGTTGATTTCGCTGATACAGATTTCAAGAAATTCCTGGCAGATGGTTATGAAACAGGAAAGTTTGGCCAAGCAATATTCATACTAACGAACGGTGGATCAACGATCAGCGAAGAAGGGAATCGGGACTCAGTGATGCAATTAACATTACAGCTCAGCGAACCCAAACCAAACTTGGAGACACATTGCGTGGGCCACAAGCGAAAAGCAGAATTTGATCTGTTCGCAAAAATAAAAAACCCGAAAATCGAAGAGAAGGAAGAGGAATCGAACAGGAAGAAAGACTTCTTGAGGCAGTCAAGCTTCAACACCCTTGACCTGAACATAAAGGCCGATGAAGAAGACGACGATGGTGAAGGTGAAAGTAGCGGTAGCCCCATTTCCAGCGACTTGACCCGAGAAACCATGCCTGATTCCTCAAACCCAAATGGGTTTCTCGACTCGATCGAGAGGCGATTCGAGTTCAATCGAAGCCCAGCTCGAGACAGAGAGAAGGCAGAGTTATTCTCGTCGAAATTCAAAGGGTCATTTGAAGAAATTCATGGGAAGCAAAATTTGAAGAATTTCAGTATAGAAGAGAGGGTTATAGAGGAAGTGACTAGTGGGTGTGGTTCATTTACTAACAGTGTGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGAAGCTTAGAAACAGGTAAGGAGGAGAAGGAGGGTATAGGTTTTAGACTTTGTTGGGGTGGGAATGGTAAAGGTAAAGGAGAGGAAATTAGGGTTTTGGAATTGGATAGTGGAGAAGATGGGTTCATGACTTCGTGTCTGCCCAAGAGTATCAAAGTTAACTACTTCATGGATTGA 3114 0.4419 MRSGGCALQQTLTSEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSFRRACLKSHPHHQTSSHSHHPLQCRALELCFNVALNRLPTTPTPNLLHTQQPSLSNALIAALKRAQAHQRRGCIEQQNQQPLLTIKVELEQLVISILDDPSVSRVMREAGFSSTAVKSSIEDSSVSPPCSVFQCYSTSGGVFSSPCSPSPSENQRETINSNNFRHTHFYTSSEYYNPVLFSPQKRTPVYPISESASSKEDIKLVLDVLLRKKKKNTVIVGDSLSITEGLVAELMGRFDRGEVPDELKSTRFIKFHLVPVSFRFMKRDEVEMNLLELKRKVDSIASGGGEGAIFYIGDLNWTGEATFFSEKDGGEVSGYNPVDHLVAEIGKLFSDHGSTPNAKIWLMTTASYQTYMKCQMRQPPLETQWSLQAVIVPSGGLGLSLHASSVLDSKMTISQNASHMLEKKLFSNSEEQDRLTCCEECASNYEKEAQLFKPGQPKLLPSWLQSHSIEAHQKEELTQLRRKWNRLCHYLHQSKHSHNHWNNSLHSNHSSNGKIYPYNSSYPLWPKQGSIFPDSSSISFADSATKPTHSSNLVPRFRRQQSCTIEFNFSNGTQKQLQATEEPSLNSLKGMEGKEVKITLALGNSPFGGSEQREESITDTTQRRAYVCKLLQENVPWQSETIPSIAEALVVDSKSQKQNTTWLILQGNDSTGKKRLAHAVAESLFGSADLIFHLDMKKKETLASSFCEMLTRALKAHEKLVVLIENVDFADTDFKKFLADGYETGKFGQAIFILTNGGSTISEEGNRDSVMQLTLQLSEPKPNLETHCVGHKRKAEFDLFAKIKNPKIEEKEEESNRKKDFLRQSSFNTLDLNIKADEEDDDGEGESSGSPISSDLTRETMPDSSNPNGFLDSIERRFEFNRSPARDREKAELFSSKFKGSFEEIHGKQNLKNFSIEERVIEEVTSGCGSFTNSVFEKWLKDIFQRSLETGKEEKEGIGFRLCWGGNGKGKGEEIRVLELDSGEDGFMTSCLPKSIKVNYFMD 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1456 1037 SUPERFAMILY Double Clp-N motif 12 172 IPR036628 -
Dere14g1456 1037 MobiDBLite consensus disorder prediction 870 906 - -
Dere14g1456 1037 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Dere14g1456 1037 Pfam Clp amino terminal domain, pathogenicity island component 138 173 IPR004176 -
Dere14g1456 1037 MobiDBLite consensus disorder prediction 881 905 - -
Dere14g1456 1037 Gene3D - 9 175 IPR036628 -
Dere14g1456 1037 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 991 - -
Dere14g1456 1037 Gene3D - 644 858 IPR027417 -
Dere14g1456 1037 FunFam protein SUPPRESSOR OF MAX2 1 9 177 - -
Dere14g1456 1037 ProSiteProfiles Clp repeat (R) domain profile. 8 179 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1456 Dere-ChrDere14 15404297 15407865 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1456 14 15404297 15407865 Dere14g1456 14 15404297 15407865 ECH