Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1451 ATGACCACCGTCGAATCAACCGAGAACGGCACCGCCACGGCGTCGGAACCCCATCCATCAGTAGTCGCATCGGAAAATGCCTCCGCCGTGGAACTAGTATCAGCCACCGCCGCCAACACCGAGGTAGCTGATGCGAACGCCACCCAGGGCAACCGATCAACTGAGGAGCCCGAGTCCGAGCCAGCTCAGGAAGCTGAAGCTTCCGCCGATCAGGGCGCTGCTACCACCACCAGCACCACTACTACCACTCCGCCCGAGAAGAGGTGGCCGGGTTGGCCCGGGGATTGCGTCTTTCGGCTCATAGTGCCGGTTCTCAAGGTAGGTAGTATTATCGGCCGCAAGGGCGAGCTCATTAAGAAGATGTGCGAGGAGACTCGAGCGCGCATTCGCGTTCTTGATGGTGCCGTGGGCACTCCTGATCGAATTGTACTCATATCAGGGAAGGAAGAGCCAGAGGCACCTCTTTCCCCTGCAATGGATGCTGTGATAAGGGTATTTAAGCGTGTCTATGGATTATCTGAAAGTGATGGTGAGAATAAAGCATCAGGACCTGCTGGGGTTGCATATGTCTCTGTTCGTCTGTTGGTGGCATCAACACAGGCTATCAATTTGATCGGAAAGCAAGGTTCATTAATTAAATCTATACAGGAGAATACTGGTGCTTCTGCTCGAGTATTGTCAGGAGATGAGGTGCCATTTTATGCTGCTGCGGATGAGAGGATTGTAGAATTGCAGGGAGAAGCCTTGAAGGTCCTTAAGGCTCTGGAAGCAGTAGTTAACCACCTAAGAAAGTTCTTAGTTGATCATAGTGTTCTTCCTCTTTTTGAGAAAAAAACTTACAATGCTACAATCTCACAAGACCGCCAAGCAGATGCCTGGGCTGACAAGACTGCTCTGCATACTGCTTCACAAACTAGCATTAGTGCTGATATTCCTCTTTCAACAAAACGGGATTCTCTCTTTGCTGACCGTGAAAATCATTTGGATTCACAACTCCCCTCGTCTGCAATGTCACTCTATGGGCAAGATTCTTCACTATCTGGTGTTCGTTCTTCAGCACTTAGCCGTGGTGGTGCTCCCATTGTTACTACGGTGATACAAACAATGCAAATACCACTATCCTATGCTGAGGACATCATTGGGATTCAAGGAACTAACATTGCTTACATTCGCCGTACTAGTGGAGCCATATTGACTGTGCAGGAGAGCAGGGTGCCTGATGAAATTATTGTGGAAATTAAAGGCACCTCAACCCAGGTTCAATTGGCACAACAGTTGATTCAGGAGGTTATAAGCAATCACAAAGAACCAGTTACTAGCAGTTACGGCAGGTTAGATGCAGGTCTGAGGTCTTCATACTCGCAGTTGGGTGGCAGTACTTCATACTCCTCATCTTCGTTGTCCTCGCAACCCTACCCAGGGTATGGCTCTTCTGGCTTAGGAGGCTATAGTAGTACTTTTAGACTTTGA 1470 0.4918 MTTVESTENGTATASEPHPSVVASENASAVELVSATAANTEVADANATQGNRSTEEPESEPAQEAEASADQGAATTTSTTTTTPPEKRWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTPDRIVLISGKEEPEAPLSPAMDAVIRVFKRVYGLSESDGENKASGPAGVAYVSVRLLVASTQAINLIGKQGSLIKSIQENTGASARVLSGDEVPFYAAADERIVELQGEALKVLKALEAVVNHLRKFLVDHSVLPLFEKKTYNATISQDRQADAWADKTALHTASQTSISADIPLSTKRDSLFADRENHLDSQLPSSAMSLYGQDSSLSGVRSSALSRGGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIAYIRRTSGAILTVQESRVPDEIIVEIKGTSTQVQLAQQLIQEVISNHKEPVTSSYGRLDAGLRSSYSQLGGSTSYSSSSLSSQPYPGYGSSGLGGYSSTFRL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1451 489 ProSiteProfiles Type-1 KH domain profile. 364 427 - -
Dere14g1451 489 Gene3D - 95 268 - -
Dere14g1451 489 ProSiteProfiles Type-1 KH domain profile. 189 258 - -
Dere14g1451 489 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 187 270 IPR036612 GO:0003723
Dere14g1451 489 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 84 458 - -
Dere14g1451 489 Pfam KH domain 98 150 IPR004088 GO:0003723
Dere14g1451 489 Pfam KH domain 192 258 IPR004088 GO:0003723
Dere14g1451 489 Pfam KH domain 367 429 IPR004088 GO:0003723
Dere14g1451 489 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 361 433 IPR036612 GO:0003723
Dere14g1451 489 ProSiteProfiles Type-1 KH domain profile. 95 162 - -
Dere14g1451 489 MobiDBLite consensus disorder prediction 1 56 - -
Dere14g1451 489 MobiDBLite consensus disorder prediction 1 90 - -
Dere14g1451 489 CDD KH-I_PEPPER_rpt2_like 191 263 - -
Dere14g1451 489 CDD KH-I_PEPPER_rpt1_like 95 163 - -
Dere14g1451 489 SMART kh_6 188 263 IPR004087 GO:0003676
Dere14g1451 489 SMART kh_6 363 432 IPR004087 GO:0003676
Dere14g1451 489 SMART kh_6 94 167 IPR004087 GO:0003676
Dere14g1451 489 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 88 150 IPR036612 GO:0003723
Dere14g1451 489 Gene3D K Homology domain, type 1 363 437 IPR036612 GO:0003723
Dere14g1451 489 MobiDBLite consensus disorder prediction 69 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1451 Dere-ChrDere14 15302234 15307857 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1451 14 15302234 15307857 Dere14g1451 14 15302234 15307857 ECH