Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0702 ATGACAATCTCGGGCAGCATTTTAGTAATTAGTTTGCTTGCGTGCATGTCTCTGGAGCTTCAAGTGCAATGTGCTGAGTTTGATACAGGATTGAGAAATGCCGCAACAACCTCTGAGGAACTGAATGTAAGCAGATCAGACTTTCCTAGTGATTTTGTCTTTGGGGTCGCTACTGCTGCTGCTCAGATTGAAGGAGCTGCAAATGAAGGAGGGAAAGGACCTAGCGTTTGGGACTACTTTGTCCGAAAATTCCCAGAGAGGATTCAGGACCACAGTAGCAACAGTCGTGCTCTTGATCATTATAAGCGATACAAGGAAGACGTGAAACTTATTAAGGATCTTGGCGTGAATAGTTACCGTTTTTCCATTTCCTGGACCAGGATATTGCCCAAGGGTTCATTGAGTGGAGGAGTGAACCAAGAGGGTATTGATCACTACAACAATCTCATTGATGAATTGCTCAAAAATGGCATTAAACCTTTTGTGACTCTGCTGCACTTCGACACACCCCAAGTCTTGCAAGAGAAGTATGGAGGACCCTTGAGCCGCTCATTTGTGGATGACTTTAAGGACTATGCTGAACTGTGTTTCAAAATATACGGAGATAGAGTGAAACATTGGTTTACAATCAATGAGCCATTTATGGTTGCCGCAGTAGGCCATGGTCTTGGTGCGGCTGCACCAGGGAGATGTTCCTCTGGCCTTTTTGAATGTCTTGCAGGCAACTCATCCACTGAACCTTATATTGTAAGCCACAACCTTCTCCTTGCTCATGCTGCTGTTGTTAAGCTCTACAGAGACAAGTTCCAGGTAAAACAAGGGGGAGAAATTGGAATCTGTCATGTTGGACCATATGCTGAGCCGTATTCAGAATCACAAGAGGATAAAGCTGCAGCCAGAAGATCAATGGACTTCGGCCTTGGATGGTTTATGGAGCCATTAGTTTTTGGAGATTATCCAAAAAGCATGAGAGATTTGGTCAAGGATAGGCTGCCCTATTTCACGCAAGAAGAGAAGAACTTGATAAAAGGGTCCTTTGATTTCATTGGAATCAATTATTATACTGCAAGATATGTTAAAAGTGCCCCACCCAATCCAAATGCACCAGCGCACTGCATGACTGACAGTTTAGCAGAAGAACAAACGGAGAGGGATGGAGTTCCTATTGGTCCTCATGCTGAAGGAAGCATGTTCATATATAGCTACCCATTGGGGCTAGAGAAGCTACTGAATTTCATGAAGGATGAGTATGACAGTCCTAAAATCTACATTTCTGAAAACGGGATCACTGAAGCAAACAAAGAGAATGCTAAAATGGAGGAAGCACTGTGGGATACACATAGAATCAACAGTATCCTAAGGCATTTATATAGGATACACAATGCAATCAAAAATGGAGTGAAGGTGAAGGGTTACATGTACTGGAGTCTGTTTGATGACTTCGAATGGGGAGAGGGTTATGTTCCAAGATTCGGGCTATACTATATAGATTTCAAGAACGATCTTAAGCGCATTCCCAAACTCTCTGTTGAGTGGTACCGCTCCTTCCTCAAAGGATCCCACTCGAAGGCTTATTCAATGTAA 1584 0.4331 MTISGSILVISLLACMSLELQVQCAEFDTGLRNAATTSEELNVSRSDFPSDFVFGVATAAAQIEGAANEGGKGPSVWDYFVRKFPERIQDHSSNSRALDHYKRYKEDVKLIKDLGVNSYRFSISWTRILPKGSLSGGVNQEGIDHYNNLIDELLKNGIKPFVTLLHFDTPQVLQEKYGGPLSRSFVDDFKDYAELCFKIYGDRVKHWFTINEPFMVAAVGHGLGAAAPGRCSSGLFECLAGNSSTEPYIVSHNLLLAHAAVVKLYRDKFQVKQGGEIGICHVGPYAEPYSESQEDKAAARRSMDFGLGWFMEPLVFGDYPKSMRDLVKDRLPYFTQEEKNLIKGSFDFIGINYYTARYVKSAPPNPNAPAHCMTDSLAEEQTERDGVPIGPHAEGSMFIYSYPLGLEKLLNFMKDEYDSPKIYISENGITEANKENAKMEEALWDTHRINSILRHLYRIHNAIKNGVKVKGYMYWSLFDDFEWGEGYVPRFGLYYIDFKNDLKRIPKLSVEWYRSFLKGSHSKAYSM 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0702 527 PRINTS Glycosyl hydrolase family 1 signature 490 502 IPR001360 GO:0004553|GO:0005975
Dere14g0702 527 PRINTS Glycosyl hydrolase family 1 signature 345 359 IPR001360 GO:0004553|GO:0005975
Dere14g0702 527 PRINTS Glycosyl hydrolase family 1 signature 422 430 IPR001360 GO:0004553|GO:0005975
Dere14g0702 527 PRINTS Glycosyl hydrolase family 1 signature 466 483 IPR001360 GO:0004553|GO:0005975
Dere14g0702 527 PRINTS Glycosyl hydrolase family 1 signature 445 456 IPR001360 GO:0004553|GO:0005975
Dere14g0702 527 Pfam Glycosyl hydrolase family 1 46 518 IPR001360 GO:0004553|GO:0005975
Dere14g0702 527 SUPERFAMILY (Trans)glycosidases 40 518 IPR017853 -
Dere14g0702 527 Gene3D Glycosidases 28 526 - -
Dere14g0702 527 FunFam Beta-glucosidase 12 33 519 - -
Dere14g0702 527 PANTHER GLYCOSYL HYDROLASE 47 522 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0702 Dere-ChrDere14 7427251 7435332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0702 34 517 Glycoside Hydrolase AT5G44640 50.206 7.50e-173 496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0698 08 10687534 10688951 Dere14g0702 14 7427251 7435332 CCT
Dere14g0702 14 7427251 7435332 Dere14g0702 14 7427251 7435332 ECH