Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0616 ATGATGTTGGAGAATAGTCATCACTTGGGTTGCCCCTACGTCCTTCTTCTTCCCCTCCATGAAGGACCTTTCAGAGCGAGTCTCCAAGCAGGTCTCGATGATTACGTGGACATCTGCCTGGAGAGTGGCTCCACGCGCGTCTCTGGGTCCAGCTTCAGAAGCTTTTTGTACATCCACGCGGGAGATGACCCTTACAGTTTGATGAAGGAAGCCATGAAAGTGATAAGAGAGCATCTGGGGACGTTCAAGCTTCTGGAAGGGAAAACCCCACCAGGTATCATGGACAAGTTTGGGTGGTGCACGTGGGACGCATTTTATCTCAAGGTGCACCCAAAGGTATCATGGACAAGTTCTGCGGAGAATGGGTGCCCTCCAGGTTTGGTAATAATTGACGATGGCTGGCAAAGCTTTTGTCACGATGACGAACCCATTAGTGATAATGGAAGCTTTAATTGCTCCATACCCGGTGAGCAAATGCTAAATAGGCTCACGAGTTTCGAAGAAAATAGCAAGTTTAAGGAGTATTGTAGTCGTAGGAGTCCTACGGACAAAGGGATGGGGGCCCTTGTTAGGGACCTGAAGGAGGAGTTTAAGAGCGTAGAGCATGTGTGCGGAGATGACGATGACGGATCTGGCGGTGGTGAAGGTGTTGGAAATTGGGGTCGGATTGGTGGCACCGGACGAAGCTCACAAGTTGTACGACTGACTTCACTCTCATCTGAAATCTGTGGCTTGTGGATGGGAAATTTCATACACCCCGACTGGGACATCTTCCAATCCAATCATGCTTGTGCTGAATTCCACGCTGCTTCTCGTGCCATCTCCGGTGGACCTGTATATGTCAGTGACTCTGTTGGGAACCACAACTTCAAGCTCCTCAAGAAGCTGGTTCTGCCTGATGGCTCCATTCTAAGATGCCAATACTACGCCCTTCCTACTAGAGACTGCTTGTTCGAAGACCCTTTGCATGATGGCAAGACCATGCTCAAAATCTGGAACATCAATAAATACACGGGAGTTTTGGGCGCGTTTAATTGCCAAGGAGGAGGGTGGTGTAGGCGAAACAAAAGTGCTTCTGAGTTCTCACACAGGGTGACTTGCTCTGCGAGTCCTAAGGACGTTGAATGGAGCAGCGGGAGGAATCCCATATCCACCAAAGAGGTGGACGTGTTTGCTATGTACACGATGAAGGATGAGAATTTGAAGCTGATGAAGTGGTCAGAGACTGTGGAGGTTTCCCTTGAGCCCTTTACTTACGAGCTGTTCACGATTTCTCCAGTGAGAGTGTGGGCTGGAAAATCAATCCAGTTTGCTCCAATTGGATTGGTGAACATGCTGAACTCAGGTGGGGCAATTCGGAGTTTGGAAATAGAGGAGGAGGAAAATGTGGCAAGAATTGGGGTGAGAGGACACGGGGAGATGAGGGTGTTCGCTTCGGAGAAGCCTGTGAGTTGTAAAATTGATGGAGTAGCAGTTGAATTTGGTTACAAGGACAACATGGTGAGGCTCCAAGTTCCGTGGCCTGGTTCTTCGTGA 1536 0.4928 MMLENSHHLGCPYVLLLPLHEGPFRASLQAGLDDYVDICLESGSTRVSGSSFRSFLYIHAGDDPYSLMKEAMKVIREHLGTFKLLEGKTPPGIMDKFGWCTWDAFYLKVHPKVSWTSSAENGCPPGLVIIDDGWQSFCHDDEPISDNGSFNCSIPGEQMLNRLTSFEENSKFKEYCSRRSPTDKGMGALVRDLKEEFKSVEHVCGDDDDGSGGGEGVGNWGRIGGTGRSSQVVRLTSLSSEICGLWMGNFIHPDWDIFQSNHACAEFHAASRAISGGPVYVSDSVGNHNFKLLKKLVLPDGSILRCQYYALPTRDCLFEDPLHDGKTMLKIWNINKYTGVLGAFNCQGGGWCRRNKSASEFSHRVTCSASPKDVEWSSGRNPISTKEVDVFAMYTMKDENLKLMKWSETVEVSLEPFTYELFTISPVRVWAGKSIQFAPIGLVNMLNSGGAIRSLEIEEEENVARIGVRGHGEMRVFASEKPVSCKIDGVAVEFGYKDNMVRLQVPWPGSS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0616 511 Pfam Raffinose synthase or seed imbibition protein Sip1 244 504 IPR008811 -
Dere14g0616 511 Pfam Raffinose synthase or seed imbibition protein Sip1 11 203 IPR008811 -
Dere14g0616 511 SUPERFAMILY (Trans)glycosidases 92 168 IPR017853 -
Dere14g0616 511 PANTHER - 245 508 IPR008811 -
Dere14g0616 511 SUPERFAMILY (Trans)glycosidases 245 305 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0616 Dere-ChrDere14 6481869 6485336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0616 245 509 Glycoside Hydrolase AT5G40390 65.672 9.83e-121 370
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0616 14 6481869 6485336 Dere14g0616 14 6481869 6485336 ECH