Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0602 ATGAAATTCATATTGGTCAGAAATTCCACAATGGGTAGCCTTTGGATATGCCATTTCTTTCTGTCTCTGGCCATACTAAATGCTTCTTTTGTCACAATTCTTGGGGATAACGCATCAGATTCCTACTGGCTTCTTAGAATCAAATCACAATTGGGTGATCCATTAGGTGCTCTAAACAACTGGTCTCCAATGGTTCCTATCTGTAGATGGTATGGACTAACATGTTCACGTGGTCAGACTCATATTATAGGCCTGAACTTGTCCGGTTCAGGAGTATCAGGTTCCATCTCAATTGAGCTCAGCCGCGTCACTTCTCTTCAAACACTTGATTTGTCCTCAAATTCCCTCTCTGGCTCCATTCCTTCTGAGATTGGGCTGCTGCAGGATCTAAGAATACTTCAGCTATTCTCAAATTCTCTCTCTGGCACCATTCCTGCCGAGATAGGTCATTTGAAGAAGTTGCAGGTTCTTAGAATAGGAGACAACTTGTTGACAGGTGAAATCACACCAAGTATAGGTAACTTGAAAGCGTTGAAAGTGTTGGGTTTAGCTTACTGCTATTTCAATGGAAGCATACCCATTGAGATAGGAAACTTGAAGAATCTAGTTTCTCTTGATTTACAGATGAACAGTCTTGGGGGACTCATACCCAAAGAGATTCAAGGCTGTAAAAAGCTGCAAAATGTTGCAGCATCAAATAACTTGCTTGAAGGAGACATACCTTCTTCTATGGGGTCTCTTGAATCACTGCAAATTCTGAACCTAGCCAATAATAGTCTCTCTGGGTCAATTCCTTCTTCCTTGAGTCATCTCTCCAAGTTAAAATACCTGAATTTGCTTGGAAACAAACTGAGTGGGGAAGTTCCTTCAGAGCTTAACAGTTTGAGTCAGCTTCAGAAGCTAGACTTATCCCAAAACAACCTCTCTGGACCAATAAACTTCGTTAATATGAAACTAGAGAGTCTCCAAAGTCTGGTTCTATCAGATAATTCTTTGACCGGTAATATTCCAGCCAACTTCTGCTTCAGAAGTTCAAAACTTGAGCAACTTTTCTTGGCCCGGAATAAACTTTCTGGTAAGTTTCCCTTGGAGTTACTCAATTGCTCCTCAATTCAACAATTGGACCTTTCTGATAACAGCTTAGAAGGGGAGCTTCCAACAACCTTGGACAAATTACAGAACCTCACAGATCTTGCTCTCAACAACAACAGCTTCATGGGATCTCTACCTTTGGAGATTGGAAACGTAAGTACCTTGGAGAGCCTCTTCTTGTTTCATAACATGTTTACGGGGAAAATTCCAGTGGAGATTGGAAGGCTTCAGAGGTTGAAAACCATATACCTCTATGATAACCAGATGTCTGGTCCAATACCAAGAGAGCTAACAAACTGCACAAGTTTAAGGGAAATTGACTTCTTTGGGAACCATTTTTCTGGGCCCATTCCAGAGACTATAGGTAAGCTCAAAGACTTGGTTCTGCTTCATCTGAGGCAGAATGACTTGTGGGGTCCTATCCCTCCAAGTATGGGGTACTGTAAAAGCCATCAGTTATTGGCATTAGCAGATAATAAATTGTCTGGTTCGATACCATCCACATTTAGTTACCTTTCAGAACTTAGAACCATTACCCTTTACAATAACTCTTTTCAAGGACCACTTCCAGAGTCACTCTTTCTTCTCAAAAACCTCAAAATCATAAACTTTTCTCATAACAGGTTCAGTGGAGCTATCCTTCCTCTCACTGGTTCAAATTCTCTGAATGCTTTGGACTTGACTAACAATAGCTTCTCAGGTCCCATCCCTTCAAGCCTAGCCATGTCAAGAAATCTCAGTCGTCTAAGACTTGCACATAATTATCTTACAGGAGGCATTCCTTCTGAACTTGGTCATCTCACTGAGCTCAACCTTCTGGATTTGTCTTTTAACAATTTGACAGGAGATGTGGCACCTCAACTCTCAAACTGTAAACAAATTGAACACCTTCTGCTTAATAATAACAGATTGAGTGGGAAAATGCCTTCTTGGTTGGGAAGCTTGCAAGAACTTGGTGAGCTGGATCTCTCATTCAATGACTTCCATGGAAGGGTACCTTCTGAGCTTGGAAACTGTTCGAAATTGCTTAAGCTTTCTCTCCATCACAACAATCTGTCAGGTGAAATCCCTCAAGAGATTGGAAATCTCACTTCCCTCAATGTCCTTGACTTGCAAAGCAATCATTTCTCTGGCCTCATTCCTTCATCAATTCAGCAATGCAAGAAGCTATATGAGCTCAGGCTCTCAGAAAACCTCATCACAGGTGATATACCAGATGAGCTAGGAGGACTCACAGAACTCCAAGTGATATTGGACTTGAGCAAGAACCTCTTATCTGGGAAAATCCCATCATCACTTGGGAACCTCATGAAACTAGAAAGACTCAATCTTTCTTTCAATAATCTTCATGGACAAGTTCCCCGTTCACTTGGAAAACTAACAAGCCTGCACGTGCTGAATATATCAAACAACCATCTCCAAGGCCAGATTCCGTCAACATTTTCAGAGTTCCCACCAAGCTCCTTCATAAACAATGACCACTTGTGTGGCCCACCATTAGTATTGTGCTCAGAATCTAAAGGGCATGATCAAGTGGTGCTGTCTAACAAAGCAGTGGCTGCAATCATAGTGGCCATTGTCTTTACTTCCACTTTGATTTGCTTAGTGTTGTTGTATATTATGGCAAGAATTTGGTGTAACTGGAGGAAAGTTGCGATTTCCAGTGCAGATGGATGCATAGGTGAGCGAAAGAGGGAGGAGTCTAGATGGGTTTGTGGTGATAAGAAGACAAGGAATGGAGAATATTGGAATATGAACTCTTTTGGGTTTATTCCTTCACCGGATAAGCAGAGTTCAGAAGCGACGGCTTGTGTTTTCAATCTTAAAATGGATGCAAAATCCATGGAAAATTCCATTGTTTGA 2955 0.4142 MKFILVRNSTMGSLWICHFFLSLAILNASFVTILGDNASDSYWLLRIKSQLGDPLGALNNWSPMVPICRWYGLTCSRGQTHIIGLNLSGSGVSGSISIELSRVTSLQTLDLSSNSLSGSIPSEIGLLQDLRILQLFSNSLSGTIPAEIGHLKKLQVLRIGDNLLTGEITPSIGNLKALKVLGLAYCYFNGSIPIEIGNLKNLVSLDLQMNSLGGLIPKEIQGCKKLQNVAASNNLLEGDIPSSMGSLESLQILNLANNSLSGSIPSSLSHLSKLKYLNLLGNKLSGEVPSELNSLSQLQKLDLSQNNLSGPINFVNMKLESLQSLVLSDNSLTGNIPANFCFRSSKLEQLFLARNKLSGKFPLELLNCSSIQQLDLSDNSLEGELPTTLDKLQNLTDLALNNNSFMGSLPLEIGNVSTLESLFLFHNMFTGKIPVEIGRLQRLKTIYLYDNQMSGPIPRELTNCTSLREIDFFGNHFSGPIPETIGKLKDLVLLHLRQNDLWGPIPPSMGYCKSHQLLALADNKLSGSIPSTFSYLSELRTITLYNNSFQGPLPESLFLLKNLKIINFSHNRFSGAILPLTGSNSLNALDLTNNSFSGPIPSSLAMSRNLSRLRLAHNYLTGGIPSELGHLTELNLLDLSFNNLTGDVAPQLSNCKQIEHLLLNNNRLSGKMPSWLGSLQELGELDLSFNDFHGRVPSELGNCSKLLKLSLHHNNLSGEIPQEIGNLTSLNVLDLQSNHFSGLIPSSIQQCKKLYELRLSENLITGDIPDELGGLTELQVILDLSKNLLSGKIPSSLGNLMKLERLNLSFNNLHGQVPRSLGKLTSLHVLNISNNHLQGQIPSTFSEFPPSSFINNDHLCGPPLVLCSESKGHDQVVLSNKAVAAIIVAIVFTSTLICLVLLYIMARIWCNWRKVAISSADGCIGERKREESRWVCGDKKTRNGEYWNMNSFGFIPSPDKQSSEATACVFNLKMDAKSMENSIV 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0602 984 SUPERFAMILY RNI-like 468 858 - -
Dere14g0602 984 Gene3D Ribonuclease Inhibitor 536 876 IPR032675 -
Dere14g0602 984 ProSiteProfiles Leucine-rich repeat profile. 249 272 IPR001611 GO:0005515
Dere14g0602 984 Pfam Leucine Rich Repeat 105 123 IPR001611 GO:0005515
Dere14g0602 984 Pfam Leucine Rich Repeat 826 847 IPR001611 GO:0005515
Dere14g0602 984 Pfam Leucine Rich Repeat 802 824 IPR001611 GO:0005515
Dere14g0602 984 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 37 193 - -
Dere14g0602 984 Gene3D Ribonuclease Inhibitor 316 535 IPR032675 -
Dere14g0602 984 PRINTS Leucine-rich repeat signature 295 308 - -
Dere14g0602 984 PRINTS Leucine-rich repeat signature 106 119 - -
Dere14g0602 984 SMART LRR_sd22_2 631 657 - -
Dere14g0602 984 SMART LRR_sd22_2 295 324 - -
Dere14g0602 984 SMART LRR_sd22_2 344 376 - -
Dere14g0602 984 SMART LRR_sd22_2 440 472 - -
Dere14g0602 984 SMART LRR_sd22_2 151 177 - -
Dere14g0602 984 SMART LRR_sd22_2 199 231 - -
Dere14g0602 984 PANTHER UNNAMED PRODUCT 18 533 - -
Dere14g0602 984 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Dere14g0602 984 SMART LRR_typ_2 247 271 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 295 316 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 536 560 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 151 175 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 824 855 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 103 127 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 631 655 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 392 416 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 727 750 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 800 823 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 679 703 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 199 222 IPR003591 -
Dere14g0602 984 SMART LRR_typ_2 319 343 IPR003591 -
Dere14g0602 984 SUPERFAMILY L domain-like 416 525 - -
Dere14g0602 984 FunFam Uncharacterized protein 194 288 - -
Dere14g0602 984 FunFam Uncharacterized protein 386 481 - -
Dere14g0602 984 SUPERFAMILY RNI-like 85 405 - -
Dere14g0602 984 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Dere14g0602 984 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 482 578 - -
Dere14g0602 984 Pfam Leucine rich repeat 729 789 IPR001611 GO:0005515
Dere14g0602 984 Pfam Leucine rich repeat 232 284 IPR001611 GO:0005515
Dere14g0602 984 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 579 871 - -
Dere14g0602 984 Gene3D Ribonuclease Inhibitor 231 315 IPR032675 -
Dere14g0602 984 Gene3D Ribonuclease Inhibitor 150 230 IPR032675 -
Dere14g0602 984 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 289 385 - -
Dere14g0602 984 Gene3D Ribonuclease Inhibitor 40 149 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0602 Dere-ChrDere14 6346298 6349252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0602 14 868 Receptor kinase-like Gene Family AT5G46330 33.102 3.37e-123 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0602 14 6346298 6349252 Dere14g0602 14 6346298 6349252 ECH