Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0578 ATGTCATTTCACACCGACTCTAACGGCCGCCTTTCCCTCCCAAAACAACTAGCACCGCCCATCGCAAAACCCCGTTCATTTCCGTTATACGCTCCACTCTCACCCCCGTACCCTTATTACCATAACTGTATTCTCTTCTTCTCCAAGAAAACCGCCTCACGTCTGTTTCTAGTTCTTACTTCCTACTTCCACTTGCTTCTTCTGCGTGACTCCTTTTCTTTCTCGCCAAGTTTTCTCTCCTTATACGATGTATACACATCTTCCTTGAAAGTTTACACGGCTTATTGTATATTTTTGTGTTTTGGCAACATGGTGCTAGAAATCTGTTACGACGGGTCTACTCAATGGTTGAAAGCTGATGAGATTGGAACTTCAGGTTCGAACAAATCCGTTCAGCAAGATTCAGGCAATGAATTAGACTGTGTGAATGTCAAGAATTCGGTCTGGGATACTGGGAGCAACGAAGAACCAACGGTTTCAGATTGCGAAAGTGGTGTTTCTGGAAGCAATTATGTGCAACACCATCTGTTCGATGAAGGTTTTGTTAGACTCGCAGAAGGAGACAGGGTTCATGACCTCATTAAAAGAAGATTCATTCTGGGTTTGGGAGCTCTTGGGGCGCAAACGGAGGTCGTCGCAATTCATAGAAATGCTTGTTCTAGCGTTATGGCGCAGGCTCGGATTCAATCATTTAAGGTTTATATGCGGGCTCAGGAAGAGAAGCGTCATGGTAATGCCAATGTGAAGCATGCTTGGTATGGGACTTCTGGCAAAGAAGAGATAGGAGAGATCATTTCACACGGTTTTGGTCATGGCGGTAAATCTCAGAACAGTGGACTCTTCGGTTGCGGAGTGTATCTCTCTTCTGATGATTCCCCTGTGGAAAGTGTGAAAAGCTCTGTTGCTGACAAAGACGGTCTAAGGCACTTACTACTGTGTCGCGTTATTTTGGGGAGGCCGGAGCTTGTGCATCCTGGTTCTGAGCAATGCCATCCGAGTTCCGGAGAATATGATTCAGGGGTGGACAGCCTTTTAGCTCCCAAGAAGTACATCATTTGGTGTACCCGGATGAACACTCATATTTTGCCGGAATATGCTATAAGTTTTAAAGTTCCTACCATGGAAGGGCTTATGAAGTCTGAAGAAACTTTTAGAAAACCATCTTCGCCCTGGATTCCATTTCCTACTCTAATCTCTGTGCTTTCTAAGTATTTGCCTCCATCTGCTATTGCCTTGATCTCCCAGTTCCACAATGATTACAGAGAAAAGAAGATTTCACGGCATGAATTGATACAAAAAGTGAGACAAATAACGGGAGACGAGTTGTTGATTACAGTTATCAAATCTTCTAGATCCAAGATGGAACGATTTCCTTCACGAGTTTTGTTAGTTGATAACAGTAGAGGTGGGGACATGATGCTCACTGACTCGGAAGCCAATTCTAGAGAGAGAGAGAGAAAAGATACAACAACTGTTCGAAGGTGCACTGGAGTGGAGTTTGACAAAACGCTTACTGACTTCTTGACCCATCTTTACAATGAGGATATTACATCTGCTTGA 1560 0.4397 MSFHTDSNGRLSLPKQLAPPIAKPRSFPLYAPLSPPYPYYHNCILFFSKKTASRLFLVLTSYFHLLLLRDSFSFSPSFLSLYDVYTSSLKVYTAYCIFLCFGNMVLEICYDGSTQWLKADEIGTSGSNKSVQQDSGNELDCVNVKNSVWDTGSNEEPTVSDCESGVSGSNYVQHHLFDEGFVRLAEGDRVHDLIKRRFILGLGALGAQTEVVAIHRNACSSVMAQARIQSFKVYMRAQEEKRHGNANVKHAWYGTSGKEEIGEIISHGFGHGGKSQNSGLFGCGVYLSSDDSPVESVKSSVADKDGLRHLLLCRVILGRPELVHPGSEQCHPSSGEYDSGVDSLLAPKKYIIWCTRMNTHILPEYAISFKVPTMEGLMKSEETFRKPSSPWIPFPTLISVLSKYLPPSAIALISQFHNDYREKKISRHELIQKVRQITGDELLITVIKSSRSKMERFPSRVLLVDNSRGGDMMLTDSEANSRERERKDTTTVRRCTGVEFDKTLTDFLTHLYNEDITSA 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0578 519 Pfam RCD1-SRO-TAF4 (RST) plant domain 386 451 IPR022003 -
Dere14g0578 519 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 156 453 IPR044964 -
Dere14g0578 519 Gene3D - 181 371 - -
Dere14g0578 519 ProSiteProfiles PARP catalytic domain profile. 165 389 IPR012317 GO:0003950
Dere14g0578 519 ProSiteProfiles RST domain profile. 385 456 IPR022003 -
Dere14g0578 519 SUPERFAMILY ADP-ribosylation 182 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0578 Dere-ChrDere14 5972611 5975592 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0786 03 12383295 12384212 Dere14g0578 14 5972611 5975592 CCT
Dere14g0578 14 5972611 5975592 Dere14g0578 14 5972611 5975592 ECH