Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0480 ATGGCTAGTGTTAGAGGTAGCAGACGGGTTGGACTAAGAACAAGCTCACGTACTCCTTTTGTGGAAGAGATAGTACCTAATTCTGGATGGACAGAGGACTCCATGGGCCATTATCTTCTAGTCGATCTTCCTGGGTTCGAGAAGGAGGAGGTGAAGCTTCAGGTTGAGGGCTCTGGCTATATCATTGTAAGAGGGGAAAGGCAAGTGAACGAGGAGAAACGTGTTCATTTTGAGCTGATTTTTCCGGTGCCAAAGGATTCAGATATAAATAAGATCGCTGGGAAATTTGACGGTGAGATCCTTCATGTGACTATCACGAAGCGAACTGCACAAAGGAACAGAGAAACTGAAACTGCGAAGGCTGTTAATGGTAGTGTTAGAAGACCAGAAGAAAACAAACGCGAGGAACACAGTGCTGATAATGAACAAAGGTATCACAACAGACAACGCAGCTGTCATAGGGAGGAGGGAAGAAGAAATGAAACTACCCAGGTAAGAGGGTTTTCTGAAGAGTTGATAAGGAAGTGGGAGAAAGAACCCAGCATATTAACAGGTGCAGTGGAAGTTTTGAGGAAGAACAAGGGAATTGTTATCACTGCAGTTTTAGCCTTTTCCTTGGGGTTGTTAGTTTCTCGCAAGTTTCAATCCTCAATAGCAGAATAG 663 0.4419 MASVRGSRRVGLRTSSRTPFVEEIVPNSGWTEDSMGHYLLVDLPGFEKEEVKLQVEGSGYIIVRGERQVNEEKRVHFELIFPVPKDSDINKIAGKFDGEILHVTITKRTAQRNRETETAKAVNGSVRRPEENKREEHSADNEQRYHNRQRSCHREEGRRNETTQVRGFSEELIRKWEKEPSILTGAVEVLRKNKGIVITAVLAFSLGLLVSRKFQSSIAE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0480 220 Pfam Hsp20/alpha crystallin family 31 114 IPR002068 -
Dere14g0480 220 SUPERFAMILY HSP20-like chaperones 16 115 IPR008978 -
Dere14g0480 220 MobiDBLite consensus disorder prediction 109 164 - -
Dere14g0480 220 CDD ACD_sHsps-like 30 107 - -
Dere14g0480 220 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 29 111 IPR031107 -
Dere14g0480 220 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 19 125 IPR002068 -
Dere14g0480 220 Gene3D - 8 116 IPR008978 -
Dere14g0480 220 MobiDBLite consensus disorder prediction 124 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0480 Dere-ChrDere14 4962900 4963826 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0480 14 4962900 4963826 Dere14g0480 14 4962900 4963826 ECH