Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0473 ATGAGTAAAGAGCTTCCTCGAGCAGCAGAAGAAACCATTGAAAATGAGGATAAAGAGGTTAAGCAAAAAAATAAGAGTGGTATTAAGAGGAAAGAAAATGAGGAAAAGAGGAAGAGGTATGGAAGAATAAGTTTGAAACACGTGCAGAAAGGGGCGCTAGCGGTTTGGGTGGCCACGGCCGCAATCCCAAACGGCGAGTCTACCCATGAATCGAAACCTGGGGAAACTGCAGATAACCCACTCGCACTTCTACCACTTTGTCTAATTCCTCCTGAGATCTTATGTGGGAAATTTCGAAGCAAGGCTTTTCTTGTAAGCAGATTAATAATTTCCAACAGCATGTTGGAGGGTCCGTCCTTTCTCGTTTCAAGGGACTTACCAAGCTCATGTGAGGAAGAGAGCAAGTGGATTTACAATACTGTTAATGTGATGGAGCTCTCAAGCAGTAAGCGCCGCCGACTGGAAGATGATGAACATATGATATTAGGAAACGCATGCAAACCTTCAGATGCTCCTAAGGAAGAGGAAACACAGATGAATGTGCACGACCTTTCTCTTTCCCATAACCAAATAAATGACCAAAATCATGCAGGTGATCAGTCAGATTCAAGCTCACTTATCCACCAACTTGGGCGGGACATCTCAATTAACTGTCTCCTTCGATGCTCAAGGTCTGATTATGGCTCAATCGCCTCGGTGAATCAGAATTTTCGGTCTCTCATTCGAAGTGGAGAACTATATAGGCTCAGGCGGCAGCTGGGTATTGTTGAACATTGGGTTTACTTCTCTTGTAAGCTCCTTGAATGGGAAGCATTTGATCCAAACCATCGTCGATGGATGCGCTTGCCCACAATGACTTCTAATGAATGCTTTAAGTGTTCAGATAAGGAGTCACTAGCTGTTGGTACAGAGCTTCTTGTTTTTGGAAAGGAAATCATGTCTCCTATTATTTACAAATATAGCATTTTGACAAACACATGGTCATCTGGTATAGAAATGAATTCTCCCAGATGCTTGTTTGGTTCTGCCAGCCTTGGAGAAATTGCTATATTGGCTGGTGGTTGTGATCCACGTGGCAACATCTTAAGTTCAGCTGAGCTTTATAACTCTGAAACTGGAACTTGGGAGACTCTTCCAAGCATGAATAGAGCAAGGAAAATGTGTTCTGGTGTATTTATGGATGGGAAGTTTTATGTCATTGGGGGGATTGGAGTTGGTAACTCAAGACAGTTAACATCTGGTGAGGAGTTTGATTTACAGACAAGAAAATGGCGAGAAATACCCAACATGTTCCCTGGGCGATATGGAGGAGCTGGGGTAACCGAGGCACCAGCTGCTGCCGAGGCACCTCCTTTAATTGCAGTTGTAAATAATGTATTGTATGCTGCAGATTATGCACTGCAAGAGGTAAGGAGGTATGATAAAGTCAGGAACTTATGGGTCACCATCGGAAGACTACCTGAGCGTGCAGCCTCAATGAATGGTTGGGGATTAGCCTTTCGTGCATGTGGAGACCGGCTAATTGTTATAGGTGGGCCTAGGGATTTAAATGTGAGGGCGATTGAAGTTAATGCTTGGGTCCCTGGTGAAGGTGAACCACAGTGGAATCTGCTTGCCAGCAGGCAATCAGGGAGCTTTGTGTATAATTGTGCAGTGATGGGATGCTGA 1668 0.443 MSKELPRAAEETIENEDKEVKQKNKSGIKRKENEEKRKRYGRISLKHVQKGALAVWVATAAIPNGESTHESKPGETADNPLALLPLCLIPPEILCGKFRSKAFLVSRLIISNSMLEGPSFLVSRDLPSSCEEESKWIYNTVNVMELSSSKRRRLEDDEHMILGNACKPSDAPKEEETQMNVHDLSLSHNQINDQNHAGDQSDSSSLIHQLGRDISINCLLRCSRSDYGSIASVNQNFRSLIRSGELYRLRRQLGIVEHWVYFSCKLLEWEAFDPNHRRWMRLPTMTSNECFKCSDKESLAVGTELLVFGKEIMSPIIYKYSILTNTWSSGIEMNSPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSETGTWETLPSMNRARKMCSGVFMDGKFYVIGGIGVGNSRQLTSGEEFDLQTRKWREIPNMFPGRYGGAGVTEAPAAAEAPPLIAVVNNVLYAADYALQEVRRYDKVRNLWVTIGRLPERAASMNGWGLAFRACGDRLIVIGGPRDLNVRAIEVNAWVPGEGEPQWNLLASRQSGSFVYNCAVMGC 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0473 555 MobiDBLite consensus disorder prediction 1 37 - -
Dere14g0473 555 SUPERFAMILY Kelch motif 266 552 IPR015915 GO:0005515
Dere14g0473 555 Pfam Kelch motif 384 430 IPR006652 GO:0005515
Dere14g0473 555 Pfam Kelch motif 336 382 IPR006652 GO:0005515
Dere14g0473 555 FunFam F-box/kelch-repeat protein SKIP11 252 540 - -
Dere14g0473 555 Gene3D - 250 540 IPR015915 GO:0005515
Dere14g0473 555 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 191 555 - -
Dere14g0473 555 SMART kelc_smart 396 444 IPR006652 GO:0005515
Dere14g0473 555 SMART kelc_smart 348 395 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0473 Dere-ChrDere14 4893170 4896380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0473 210 486 Miscellaneous Gene Families AT4G33900 25.868 9.44e-14 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0473 14 4893170 4896380 Dere14g0473 14 4893170 4896380 ECH