Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0434 ATGCACAGCACTGACCCGCACGAAAGACAGGTCGGGTTTGCAGCCCCTCTTCTCTCCGATCATCCTCTGATCAGCTCTCGTCGGCATTTACTCATCAAATTCCAATCCTCTGATCAAAATCCGGTGGGTGAGAAGTTAGGAGCGATGAGTCAGGTATTCGATGGCTACGAGCGTTCATACTGTGAGCTATCGGCTAGTCTTTCCCGGAAATGCACGGCAGCGTCTGCCCTTGATGGAGAGCAGAAGAAGCAGAAGCTTTCTGAAATAAAAGCTGGACTAGATGATGCAGATGCATTGATTCGGAAAATGGACCTTGAGGCTAGGAGCTTGCAGCCAAATATGAAGGCAACACTTCTTGCCAAGTTAAGGGAATATAAAACTGATTTGAACAATTTAAAAAACGAAGTTAAAAGAATCTCATCAGCTAATGCCAACCTGGCTGCTCGTGATGAGTTGCTGGAGTCAGGAAGTGCTGATGCACTGATGGTATCAAATGATCAAAGAGGAAGACTGCTGATGTCAACTGAGAGATTAAATCAGTCCACAGATAGAATAAAGGCGAGTAGAAAAACAATGCTGGAGACTGAGGAGCTTGGAGTCTCTATCCTCCAAGACCTGCATCAACAACGCCAATCTCTACTCCATGCCCATAATACGCTCCATGGAGTGGATGATAACATTAGCAAAAGCAAGAAGATTTTGTCATCGATGTCGAAAAGAATGAACAGGAATAAATGGATTGTTAGCTCATTAATCACAGCTCTGGTCATTGCAATTATATTAATCCTATATTTCAAGTTGACTCATTAG 810 0.437 MHSTDPHERQVGFAAPLLSDHPLISSRRHLLIKFQSSDQNPVGEKLGAMSQVFDGYERSYCELSASLSRKCTAASALDGEQKKQKLSEIKAGLDDADALIRKMDLEARSLQPNMKATLLAKLREYKTDLNNLKNEVKRISSANANLAARDELLESGSADALMVSNDQRGRLLMSTERLNQSTDRIKASRKTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKKILSSMSKRMNRNKWIVSSLITALVIAIILILYFKLTH 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0434 269 Gene3D - 165 245 - -
Dere14g0434 269 Gene3D - 47 147 IPR038407 -
Dere14g0434 269 FunFam Vesicle transport through interaction with t-SNAREsB 165 245 - -
Dere14g0434 269 SUPERFAMILY SNARE fusion complex 178 237 - -
Dere14g0434 269 Coils Coil 115 149 - -
Dere14g0434 269 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 56 264 - -
Dere14g0434 269 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 49 147 - -
Dere14g0434 269 CDD SNARE_Vti1 175 236 - -
Dere14g0434 269 Pfam Snare region anchored in the vesicle membrane C-terminus 176 241 - -
Dere14g0434 269 Pfam Vesicle transport v-SNARE protein N-terminus 60 138 IPR007705 GO:0006886|GO:0016020
Dere14g0434 269 SUPERFAMILY t-snare proteins 54 140 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0434 Dere-ChrDere14 4551754 4554464 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0434 14 4551754 4554464 Dere14g0434 14 4551754 4554464 ECH