Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0307 ATGCCATTGCTCTTCGTCTTCTTTGCTATGGTCCCAAGAGGATTTGGTGTTGGGGTGAACTGGGGAACCATGGCTACCCATCAGCTTCCGCCTGAGAAGGTGGTTAAGATGCTGAAGGAAAATGGGTTTAATAAATTGAAGCTGTTTGATGCAGACGAGTGGATCATGAAGGCTCTGATAGGAACTGATATCGAAGTGATGCTAGCAATACCCAATGGCATGTTGGCGGAGATGAGTGAGAATCCCGGGGCTGCAGATTCTTGGGTCGATGAAAATGTGACCAGTTACTTGTATACCGGTGGAGTCAATATCAAGTTTGTTGCCGTGGGTAATGAGCCTTTCCTGAAAGCATATAACGGCAGCTATCTACATACAACTCTACCAGCTCTTAAAAATATACAAACATCACTCTATAATGCTGGCTTGGGTTCAAAGGTCAAAGTCACAGTTCCCTTCAATGCTGACATTTACTTCTCCCCTGATTCAAATCCTGTGCCATCAGCTGGTGACTTCAGGCCTGAACTACGAGACCTCACAATTGAAATCATCCAATTCTTATATTCATGCAATGCACCTTTTACAGTAAATATCTATCCCTTCCTCAGTCTATATGGCAATGACAATTTCCCCATTGAATTCGCATTTTTTGATGGAAACAACAAACCTCTTAGAGATGGAAATTCACTTTACACCAATGTGTTTGATGCCAATTTGGATACTCTTCTATGGGCTTTAGACAAGGCAGGGTACCCTGACATGCAGGTCCTAGTTGGAGAAGTTGGGTGGCCAACTGATGGTGATAAGAATGCTAACATCCGAAATGCAAAGAGGTTCAACCAGGGTTTGCTTAAACATGTTCTAAGTGAAAATGGTACCCCCAAAAGGAAAGGGATCCTTGACATTTATTTATTCAGCCTCATGGATGAAAATGCGAAAAGTGTTGCTCCCGGGACCTTTGAGAGGCATTGGGGGATTTTTGAGTTTGATGGGAAGCCAAAGTATGAACTAGATTTAACAGGTCGAGAACTAAATAAGGGTTTGGTCCCTGTGGAGGGTGTAAAATACATGGAAAAACAGTGGTGCGTTTTGGACTCTAATGCTAGAACTGACTCGCAATACTTGGCTCGTAGTATTGACTATGCTTGTAGTCTATCTGACTGCACTGCTCTAGGCTATGGATCTTCTTGTAATAATCTGAGTCTCCAAGGGAATGCATCTTATGCCTTCAACATGTATTATCAAGTCCATAACCAAATGGATTGGGGCTGTGATTTCTCTGGATTGGCTATTGTAACAGATGAGGATCCTTCAGAAAAGGGATGCCAGTTTCCGGTGATTATTTCTCATGGTTTTTCTTTGCTGATGCATGGAGGGCTGTCAGATATACTAAAGAAAGCTGTAGGTGTATGTATTTTGGTTATGTGTTTGCTATAG 1434 0.4247 MPLLFVFFAMVPRGFGVGVNWGTMATHQLPPEKVVKMLKENGFNKLKLFDADEWIMKALIGTDIEVMLAIPNGMLAEMSENPGAADSWVDENVTSYLYTGGVNIKFVAVGNEPFLKAYNGSYLHTTLPALKNIQTSLYNAGLGSKVKVTVPFNADIYFSPDSNPVPSAGDFRPELRDLTIEIIQFLYSCNAPFTVNIYPFLSLYGNDNFPIEFAFFDGNNKPLRDGNSLYTNVFDANLDTLLWALDKAGYPDMQVLVGEVGWPTDGDKNANIRNAKRFNQGLLKHVLSENGTPKRKGILDIYLFSLMDENAKSVAPGTFERHWGIFEFDGKPKYELDLTGRELNKGLVPVEGVKYMEKQWCVLDSNARTDSQYLARSIDYACSLSDCTALGYGSSCNNLSLQGNASYAFNMYYQVHNQMDWGCDFSGLAIVTDEDPSEKGCQFPVIISHGFSLLMHGGLSDILKKAVGVCILVMCLL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0307 477 Gene3D - 354 446 - -
Dere14g0307 477 Gene3D Glycosidases 16 345 - -
Dere14g0307 477 SMART X8_cls 359 443 IPR012946 -
Dere14g0307 477 ProSitePatterns Glycosyl hydrolases family 17 signature. 253 266 IPR000490 GO:0004553|GO:0005975
Dere14g0307 477 FunFam Glucan endo-1,3-beta-glucosidase 5 16 344 - -
Dere14g0307 477 Pfam X8 domain 359 429 IPR012946 -
Dere14g0307 477 SUPERFAMILY (Trans)glycosidases 17 337 IPR017853 -
Dere14g0307 477 FunFam Glucan endo-1,3-beta-glucosidase 8 355 451 - -
Dere14g0307 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 432 IPR044965 GO:0004553|GO:0005975
Dere14g0307 477 Pfam Glycosyl hydrolases family 17 17 337 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0307 Dere-ChrDere14 3182478 3185019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0307 16 447 Miscellaneous Gene Families AT2G19440 59.722 0.0 525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0307 14 3182478 3185019 Dere14g0307 14 3182478 3185019 ECH