Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0243 ATGAAATTCGGCAAGAGTCTGAGTAACCAGATGGAGAAAACCCTGCCAGAATGGCGCGATAAGTTCCTCTGCTACAAGGAACTCAAGAAGAAGTTGAAGCAGTTGGAGCCTGCTGCTAAAACTGGTGATGATAGTGGCCACGACAGGCCCGCCAAACGGCCCAGAGTCATCGACGCTTCCGATTGCAGGGACGGCGGAGACAAGGAAGTCATGTCCAAGGAGGAGAGCGACTTCAGGAACTTGTTGGAGGACGAGCTCGAAAAATTTAATAACTTCTTCGTTGAGAAGGAGGAAGAGTACATTATCAAATTGAAGGAGTTACAAGATAGGGTGGCGAAAGTTAAGGATTCTAATGAAGAGCTGTTGAAAATTCGGAAAGAAATTGTGGATTTCCATGGGGAAATGGTCTTGCTGGAAAACTACAGTGCCCTTAACTATACAGGACTTGTGAAAATACTAAAGAAGTATGATAAAAGAACTGGTGCTCTTATTCGCTTGCCTTTCATTCAGAAGGTCTTGCAACAGCCATTTTTTACCACTGACCTGCTCTACAAGCTTGTAAAGGAGTGTGAGACAATGCTGGACCGCCTCTTTCCTGCAAATGAACCTCTAGCCTCCGGTGAGGGAACTTCACAAGCAGAAGGGCGTGATCCTTCAAGTTCAACCACGACCAATAGTAATGGTCTGCTGATACGGAAGGAACTGTCAGAGATTGAGTACATGGAGAGCCTCTATATGAAGAGTACCATATCAGCATTGCATGTTTTGCAGGAGATTAGAAGTGGAAGTTCTACAGTTAGCATGTTTTCATTGCCACCACTGCAAATGAGTGGTTTGGAAGAAACATGGAAGAAAATCCCGGTTCTGGAACAAACAGCCAAGTAA 885 0.4497 MKFGKSLSNQMEKTLPEWRDKFLCYKELKKKLKQLEPAAKTGDDSGHDRPAKRPRVIDASDCRDGGDKEVMSKEESDFRNLLEDELEKFNNFFVEKEEEYIIKLKELQDRVAKVKDSNEELLKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLDRLFPANEPLASGEGTSQAEGRDPSSSTTTNSNGLLIRKELSEIEYMESLYMKSTISALHVLQEIRSGSSTVSMFSLPPLQMSGLEETWKKIPVLEQTAK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0243 294 Pfam SPX domain 1 40 IPR004331 -
Dere14g0243 294 Pfam SPX domain 120 172 IPR004331 -
Dere14g0243 294 ProSiteProfiles SPX domain profile. 1 170 IPR004331 -
Dere14g0243 294 MobiDBLite consensus disorder prediction 36 69 - -
Dere14g0243 294 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 280 IPR031142 GO:0016036
Dere14g0243 294 MobiDBLite consensus disorder prediction 205 226 - -
Dere14g0243 294 Coils Coil 97 124 - -
Dere14g0243 294 MobiDBLite consensus disorder prediction 202 226 - -
Dere14g0243 294 CDD SPX_AtSPX1_like 2 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0243 Dere-ChrDere14 2544511 2547391 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0243 14 2544511 2547391 Dere14g0243 14 2544511 2547391 ECH