Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g2077 ATGGAAAGCCAATGGCGGAAAGAGCATAATGGGAACAGCGATCAGTTTTTGTCTGAATATGATGATCTCGTTTTAGATCGATGCGTACCCAGTAGAGGGCATAGCCCACTCGTTCTGCCCAATGCATCTCCTTCTAGAGTAGGCTACATCGAACACCCTGTCTCAAAATTGGACACTCTTGCTGGAATCGCAATCAAGTACGGTGTTGAGGTTTCGGACATAAAAAAAATTAATGGCCTTGTTACAGACCTCCAGATGTTTGCTCTTAATACTCTCCACATCCCACTACCTGGAAGACATCCTCCTTCAGACGGTTCCACTACTACAGGAGAGATTGGAATCAGTAACTTGACCGATATGGTTAAACATGATATTGAAGCTAGTCAAGTAGGTAGTGATGCAATTGGATTGTTAGGTTGTCATTCGTCCAAAAGATCTAATTTGGAATTTGGATTTAGATGCATGAATTGCTAGATCGAGGAAAGGTCTGATATTGTGCCTGCTGATAAATCAAGGGAAGGTGACTCTGATAATAAACTTGTCAGGAGGCGTCAGAAATCTGAAGTGGTCTTTGCTATACCAGAGTTGCTCTTGAGGGAGGATAATAGCAGCAGCTGTGGTTTCCCATCAAGAACAGGAAAAGGCTTAGCCCTGAGACAGAAATCAGCAAGCCGAGCTTCGTTGACGACAGATTCTGAAGCAAGTGGGTTAAATTCTGTGCCAATTGGTTTGGAGGATATATTCCTTACGGATGGACCATCTGGTGTGAAGAAATCATCCAGCACATCATGTTTACAAGATGAGGGTAGCTCATCCATCTGGCCAACCTCAAAGTGGAGTTTGAAACCAGATTTGCAGGCCTCTGCAGCTGCAAAACCGATGTTTGATGGCTTGCCCAAACCGTTAACTAGTCGAAGAAACAAAGCTGCAATTGATAAACATATATAG 948 0.4346 MESQWRKEHNGNSDQFLSEYDDLVLDRCVPSRGHSPLVLPNASPSRVGYIEHPVSKLDTLAGIAIKYGVEVSDIKKINGLVTDLQMFALNTLHIPLPGRHPPSDGSTTTGEIGISNLTDMVKHDIEASQVGSDAIGLLGCHSSKRSNLEFGFRCMNCXIEERSDIVPADKSREGDSDNKLVRRRQKSEVVFAIPELLLREDNSSSCGFPSRTGKGLALRQKSASRASLTTDSEASGLNSVPIGLEDIFLTDGPSGVKKSSSTSCLQDEGSSSIWPTSKWSLKPDLQASAAAKPMFDGLPKPLTSRRNKAAIDKHI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g2077 315 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 35 244 IPR045030 -
Dere13g2077 315 CDD LysM 58 94 IPR018392 -
Dere13g2077 315 Gene3D LysM domain 40 104 IPR036779 -
Dere13g2077 315 SUPERFAMILY LysM domain 50 95 IPR036779 -
Dere13g2077 315 MobiDBLite consensus disorder prediction 296 315 - -
Dere13g2077 315 ProSiteProfiles LysM domain profile. 50 94 IPR018392 -
Dere13g2077 315 Pfam LysM domain 54 94 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g2077 Dere-ChrDere13 27941614 27944652 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g2077 13 27941614 27944652 Dere13g2077 13 27941614 27944652 ECH