Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1987 ATGTCAACTTTGACGACGCCTCCTGCCGCCACTTTTTCGGCTCGGGAAGATGCCGCTCGCCTCCGCAAAGCTTTGAAAAAAGGAATTCGCTGCAAAACTTCAGTAGTTATTGACATCCTTGCTCACAGAGATTCAGCACAGCGTGACCTCATTCTACAAGAATACGAGACTGCACATTCTGAACCGCTTACTAAACGTATAAGCTCAGAGCTTCATGGGAATCTTAAGAAAGCATTGCTTCTTTGGATGGATGAACCTGCCACCAGGGATGCTACCATAGCAAGGCAAGCCTTGACTTCACCTCTTGTTGATTATCAAGCTATAACTGAAGTGATATGTTCTCGGTCCCCATCACAAATAAGGCGTTTTAAAGAAGTTTATCTGAAAATTTACCATACTCATTTAGAGAGGGACATTGAAGACCATCTATCTGGAGATCTCAAGAAGCTGTTGCATGAGTATATAAACATACCGCGTTATGAAGGCCCAGAATTTGATCAAGAGATAGTAGAGAAGGATGCCAAAGATCTGTATACAGCAGGGGAGAGAAAGGTGTTGGGAACTGATGAGAAGACTTTCATAAGGATCTTTAGTGACAGAAGCAGGACACATTTGGCTGCTATTGCCGAAGCTTATGAAAGAAACCAGGGCCACTCACTCGAAAAGGCAATAAAGAAAGAAACAAGTGGCTATTTTGAGAGAGGCCTCTTGGCCATACTACGGTGTGGTACTAACCCTGCATTATATTTTGCCAAGATTCTACGCAAATCAATGAAGGGTTTGGGAACTGATGATAGTAGACTAACAAGGGTAGTTGTGACAAGAACTGAGATTGATATGTGCCAAATAAAAGATGCCTACTACACCAGATATGGAAAACCATTAGCTCATGCTGTTCGTTCAGACACATCTGGCCATTATAGGGACTTCCTTCTATCTCTTATAGGCAGTGATTATTAG 960 0.426 MSTLTTPPAATFSAREDAARLRKALKKGIRCKTSVVIDILAHRDSAQRDLILQEYETAHSEPLTKRISSELHGNLKKALLLWMDEPATRDATIARQALTSPLVDYQAITEVICSRSPSQIRRFKEVYLKIYHTHLERDIEDHLSGDLKKLLHEYINIPRYEGPEFDQEIVEKDAKDLYTAGERKVLGTDEKTFIRIFSDRSRTHLAAIAEAYERNQGHSLEKAIKKETSGYFERGLLAILRCGTNPALYFAKILRKSMKGLGTDDSRLTRVVVTRTEIDMCQIKDAYYTRYGKPLAHAVRSDTSGHYRDFLLSLIGSDY 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1987 319 Pfam Annexin 249 314 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 Pfam Annexin 173 239 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 Pfam Annexin 89 152 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 Pfam Annexin 17 81 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 SMART annex3 262 314 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 SMART annex3 187 239 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 SMART annex3 30 82 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 SMART annex3 103 154 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 FunFam Annexin 159 245 - -
Dere13g1987 319 SUPERFAMILY Annexin 5 318 IPR037104 GO:0005509|GO:0005544
Dere13g1987 319 ProSiteProfiles Annexin repeat profile. 245 316 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 Gene3D Annexin 1 83 IPR037104 GO:0005509|GO:0005544
Dere13g1987 319 ProSiteProfiles Annexin repeat profile. 85 156 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 Gene3D Annexin 246 317 IPR037104 GO:0005509|GO:0005544
Dere13g1987 319 ProSiteProfiles Annexin repeat profile. 168 241 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 PANTHER ANNEXIN 14 314 - -
Dere13g1987 319 ProSitePatterns Annexin repeat signature. 262 314 IPR018252 GO:0005509|GO:0005544
Dere13g1987 319 Gene3D Annexin 85 155 IPR037104 GO:0005509|GO:0005544
Dere13g1987 319 ProSiteProfiles Annexin repeat profile. 12 84 IPR018502 GO:0005509|GO:0005544
Dere13g1987 319 FunFam Annexin 246 317 - -
Dere13g1987 319 PRINTS Annexin family signature 67 83 IPR001464 GO:0005509|GO:0005544
Dere13g1987 319 PRINTS Annexin family signature 178 204 IPR001464 GO:0005509|GO:0005544
Dere13g1987 319 PRINTS Annexin family signature 94 115 IPR001464 GO:0005509|GO:0005544
Dere13g1987 319 PRINTS Annexin family signature 27 49 IPR001464 GO:0005509|GO:0005544
Dere13g1987 319 PRINTS Annexin family signature 302 315 IPR001464 GO:0005509|GO:0005544
Dere13g1987 319 PRINTS Annexin family signature 258 278 IPR001464 GO:0005509|GO:0005544
Dere13g1987 319 Gene3D Annexin 159 245 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1987 Dere-ChrDere13 26989865 26993488 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1987 13 26989865 26993488 Dere13g1987 13 26989865 26993488 ECH