LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere13g1979	ATGGCAATGCCGTCGGGAAATGTGGTAGTACCGGACAAAATGCAGTTTCCAAGCGGTGGCGGTGGTGTGGCTGTCAGTGGAGGCAGTGAGATCCCCCAGCATCACTACCGCCAACAATGGTTTGTGGATGAGCGTGATGGGTTTATCAATTGGCTGCGCAGCGAATTCGCTGCTGCAAATGCAATTATAGATTCTCTTTGTCACCATTTACGCGCAATTGGTGACCCTGGTGAATATGATATGGTCGTTGGGGCCATTCAGCAAAGGCGGTGTAATTGGAATCAGGTGCTTCTTATGCAGCAATACTTTTCGGTGGCGGAAGTGGTATTTGCCCTCCAGCAAGTGGCGTGGAGGAGGCAGAGGTGTATGGATCCAGTGAAAGTGGGTGGGAAGGAATATAAGAAATCTGGTCCTGGATATAATAAGCAGGGGCAGCGGTTTGAGGTAGTAAAGGAAGGGCATAATTCCAATGTAGAATCTTTCAGTCATGAAGGCAATTCTGTGGTTACTGGAGGCAGAGAGAAAGGAGCTCCACTAACCGACAAACAAGAAGAACATAAATCAGGTGGCAAAGTTGGGAAGATGGATGATAAGAGTTTAGGGTCTGCTGAAGAAAAGAAAGATGCTATAACAAAGCTTCAGAATGATGGGAGCTTGAAAAGCTCAGGGAATTCTACGGCATCTCTGTCTAACTCAGAATCTGAAGCTGTGGTTGTAAATGATGGATTTATATCAAATTCCAAAGAGGATGACTCACATTCTATGCAAAATCATCATCAGAACCAAGCAAAAACTTTTATTGGCAACGAGATGTTTGATGGGAAGATGGTGAATGTGGTTGATGGGCTTAAGTTGTATGAAGATTTATGTGATGGCGCTGAAGTATCAAAACTTGTTTCACTGGTAAATGATATGAGGGCTGCTGGAAAAAGAGGACAATTTCATGGAAGTCAGACATATGTGGTTTCAAAAAGGCCCATGAAAGGTCATGGAAGGGAGATGATTCAGTTGGGTGTCCCTATTGCTGATGCACCACCAGATGAAGAAAATCTGACAGGAGCCTCCAAAGATAAAAAAGTAGAATCTATCCCTGCCTTGTTTCAAGATATTATTGAGCGCTTGGCAGCCTCACAAGTTATGACTGTGAAGCCTGATGCTTGCATTGTGGATTTCTATAATGAGGGTGATCACTCGCAGCCTAACAATTGGCCACCTTGGTTTGGAAGGCCTGTTTATGTACTTTTCCTGACAGAATGTGACATGACATTTGGGAGAGTTATTGTCTCGGACCATCCTGGGGATTATAGAGGCACTATCAAGCTTTCTCTTGCACCTGGGTCCCTTCTGGTGATGCAAGGGAAATCTGCTGATTTTGCTAGACACGCCATTCCTTCTATTCGCAAACAGCGCATACTCGTTACTTTCACCAAGTCCCAACCGAAAAAATCACTGCCTAATGATGCTCAGCGTCTTGCTTCATCTGCAGCATCTTCTCATTGGGGTCCACCTTCCAGCAGATCTCCCAATCATATACGTCATCATTTAGGCCCCAAGCATTATAATCCAGCTCCAACGACAGGAGTATTGCCAGCCCCACCTATTCGGCCCCAAATTCCTCCTCCAAATGGTATACAGCCATTGTTTGTGCCTGCGCCGGTTCCACCTCCCTTGCAATTTCCTGCATCAGTTCCTATCCCACCAGGTTCTACTGGATGGACAACAGCTCCTCCAAGGCATCCTCCTCCCCGAATTCCTGTTCCTGGAACTGGAGTCTTCCTCCCTCCACCAGGCTCAGGTAATTCATCTCAGCCGTTAACAGGTACCTTGACTGAGATGAACACGAGTGTGGAAACTGCAACTGTGGCGGAAAAAGAAAATGGGAAGTCTAATCATAATAGTATGAGTGCTTCACCAAAAGTAAAATTGGATGGACAGACGCAAAGGCAAGAATGCAATGGAAATGTGGGTGAAACTGAAGCTGAGCAAGCTGTCGAGAAAGAGCAGGCAAGTAATGATGAAGTTGCGGTAAGCCATTAA	2037	0.4575	MAMPSGNVVVPDKMQFPSGGGGVAVSGGSEIPQHHYRQQWFVDERDGFINWLRSEFAAANAIIDSLCHHLRAIGDPGEYDMVVGAIQQRRCNWNQVLLMQQYFSVAEVVFALQQVAWRRQRCMDPVKVGGKEYKKSGPGYNKQGQRFEVVKEGHNSNVESFSHEGNSVVTGGREKGAPLTDKQEEHKSGGKVGKMDDKSLGSAEEKKDAITKLQNDGSLKSSGNSTASLSNSESEAVVVNDGFISNSKEDDSHSMQNHHQNQAKTFIGNEMFDGKMVNVVDGLKLYEDLCDGAEVSKLVSLVNDMRAAGKRGQFHGSQTYVVSKRPMKGHGREMIQLGVPIADAPPDEENLTGASKDKKVESIPALFQDIIERLAASQVMTVKPDACIVDFYNEGDHSQPNNWPPWFGRPVYVLFLTECDMTFGRVIVSDHPGDYRGTIKLSLAPGSLLVMQGKSADFARHAIPSIRKQRILVTFTKSQPKKSLPNDAQRLASSAASSHWGPPSSRSPNHIRHHLGPKHYNPAPTTGVLPAPPIRPQIPPPNGIQPLFVPAPVPPPLQFPASVPIPPGSTGWTTAPPRHPPPRIPVPGTGVFLPPPGSGNSSQPLTGTLTEMNTSVETATVAEKENGKSNHNSMSASPKVKLDGQTQRQECNGNVGETEAEQAVEKEQASNDEVAVSH	678

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere13g1979	678	MobiDBLite	consensus disorder prediction	477	541	-	-
	Dere13g1979	678	Gene3D	-	267	484	IPR037151	-
	Dere13g1979	678	MobiDBLite	consensus disorder prediction	620	678	-	-
	Dere13g1979	678	MobiDBLite	consensus disorder prediction	620	656	-	-
	Dere13g1979	678	MobiDBLite	consensus disorder prediction	526	541	-	-
	Dere13g1979	678	MobiDBLite	consensus disorder prediction	214	234	-	-
	Dere13g1979	678	MobiDBLite	consensus disorder prediction	157	234	-	-
	Dere13g1979	678	MobiDBLite	consensus disorder prediction	177	213	-	-
	Dere13g1979	678	SUPERFAMILY	Clavaminate synthase-like	273	475	-	-
	Dere13g1979	678	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	39	636	IPR044842	GO:0003729\|GO:0006402\|GO:0032451
	Dere13g1979	678	MobiDBLite	consensus disorder prediction	477	505	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere13g1979	Dere-ChrDere13	26917665	26926173	Dispersed/Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere13g1979	13	26917665	26926173	Dere13g1979	13	26917665	26926173	ECH