Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1978 ATGGCAGTCACGCTGCTCTCTCAGGCTTCGCTGATTCAGCCGAATCGTTCTGTGAATCTTGGAGCCCAGAAATTTCCTCGCGTAGCTCAGAAACTCCGAATTCGGCCTGCTTCCCCAAATGTACGGTTTGTGGCCAAAATGAAGAATGGGTTCGTCCCAAAAGCATCGGCGGCTGTCTTGGAATCGAATTCCAGCTCTCCAGTTTCAGCTACGACGGCCAGAAATCCCATCATTGTCATTGACAACTACGACAGTTTTACCTATAATCTTTGTCAGTATATGGGTGAGCTGGGATTTCACTTTGAGGTCTATCGGAATGATGAGTTGACCATCGACGAGTTAAAGGGGAAAAATCCTAGAGGAGTGCTAATATCACCTGGGCCAGGCGCACCTCAAGATTCTGGCATATCTTTGCAAACAGTTCTGGAATTTGGGCCAACTGTACCTTTGTTCGGTGTGTGCATGGGTTTGCAATGTATTGGAGAGGCTTTTGGCGGGAAAGTTGTGCGCTCTCCTCTTGGCGTTGTGCATGGAAAAAGCTCTTTGGTGTATTACGACGAGAAGGGAGAAGATGGATTGTTTTCTGGTTTATCAAACCCTTTCACTGCTGGTAGATATCACAGCCTTGTGATCGAAAAGGAGAGTTTTCCTCATGAAGAACTTGAGATAACAGCCTGGACAGAGGATGGTCTTATAATGGCTGCCCGTCACAAGAGATATAAGCATGTGCAGGGGGTTCAATTTCATCCTGAGAGCATTATAACCACCGAAGGCATGACAATTGTCCGTAATTTTGTCAACATTATAGAGAGAATGGAGGCTGGTGGTTCATAA 834 0.4628 MAVTLLSQASLIQPNRSVNLGAQKFPRVAQKLRIRPASPNVRFVAKMKNGFVPKASAAVLESNSSSPVSATTARNPIIVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTIDELKGKNPRGVLISPGPGAPQDSGISLQTVLEFGPTVPLFGVCMGLQCIGEAFGGKVVRSPLGVVHGKSSLVYYDEKGEDGLFSGLSNPFTAGRYHSLVIEKESFPHEELEITAWTEDGLIMAARHKRYKHVQGVQFHPESIITTEGMTIVRNFVNIIERMEAGGS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1978 277 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 76 275 - -
Dere13g1978 277 SUPERFAMILY Class I glutamine amidotransferase-like 77 271 IPR029062 -
Dere13g1978 277 FunFam Anthranilate synthase beta subunit 1 75 268 - -
Dere13g1978 277 PRINTS Anthranilate synthase component II signature 122 131 - -
Dere13g1978 277 PRINTS Anthranilate synthase component II signature 77 91 - -
Dere13g1978 277 PRINTS Anthranilate synthase component II signature 198 210 - -
Dere13g1978 277 PRINTS Anthranilate synthase component II signature 245 258 - -
Dere13g1978 277 PRINTS Anthranilate synthase component II signature 149 160 - -
Dere13g1978 277 PRINTS Anthranilate synthase component II signature 175 183 - -
Dere13g1978 277 PRINTS Glutamine amidotransferase superfamily signature 122 131 - -
Dere13g1978 277 PRINTS Glutamine amidotransferase superfamily signature 245 258 - -
Dere13g1978 277 PRINTS Glutamine amidotransferase superfamily signature 149 160 - -
Dere13g1978 277 Gene3D - 75 268 IPR029062 -
Dere13g1978 277 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 119 133 - -
Dere13g1978 277 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 149 165 - -
Dere13g1978 277 Pfam Glutamine amidotransferase class-I 79 266 IPR017926 -
Dere13g1978 277 CDD GATase1_Anthranilate_Synthase 77 266 IPR006221 -
Dere13g1978 277 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 62 273 - -
Dere13g1978 277 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 77 267 IPR006221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1978 Dere-ChrDere13 26907056 26911321 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1978 13 26907056 26911321 Dere13g1978 13 26907056 26911321 ECH