Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1939 ATGGCAGCTTCTTTGGAGGATCATCATCAGGCACTCTCCATCAATGGAGAAAACAATCATCATGAAAAGCAGATTGTCCGTGCATTGCCCACAATTGGAGGTTGTGGCAAACACAGCCATTCCAGAAACTCCTATCTTCAGAGACAAAGTTCAAGCCTCGAAAGGAAAAAGATCGAAGAAGAAATCTTCAAGAAACTGGACGTGAAAAAGCTTGCTTCTTCCTCAAACAACACAATTCGCATCGCAGATCTGGGATGTGCCACTGGTCCAAACGCCTTCTTCCACACCCATTACATCCTGGAAGCCATCAAACACAAGTTCAAAACCCAACAAACAACTAATACTACAACATCTTCAATAACTAATATAATAATAATGCCTACATTCCAAGTGTTCTTTAACGACCTTCCCTCCAACGATTTCAACACCCTCTTCACTACCTTGCCTGAGGACAGGGAATATTTTGCAGCAGGTGTTCCAGGGTCCTTCTATGGAAGCTTGTTTCCTGAATCTTCTATTCACCTTGCTTATACAGTTCAAGCACACCATTTTCTGTCCAAGGCTCCAGAAGTGTTGCAAGAGAAAGGATCTGGTGCTTGGAACAAGGGTAGGGTTCATTACACTAGTGCTTCCAAGGAGGTGGTGGAAGCGTACAAGTGGCAGTTCAGTGAGGATGCAAGGAAGTTTCTGGAAGCTAGGGCAAGGGAGATTGTGGGAGGTGGAATGCTGGTCATACTCATGCAAGGTGTTCCTAATGGTATGCCTCATTCTGAAATACCCATTGGCATGGTCTATGATTGTATGGGGTCCATTCTCAAGGACATGGCAAGTGAGGGTTTGTTGGATGAATCAAAACTGGACTCCTTCAATCTGCCGTACTATGCTCCATCCCCAGAGGAGATGACAAAGCTGATAGAAGCAAATGGCAGCTTCACCATTGAGCGAACGGAGCTTACAGACCCTGCACCATGGCTCATGCGTACCAGCGACGTAAGCATCTCTGAGTGGATCGCTCATGTGAGGGCTGCCATGGAAGCTGTTTTCACCACACACTTTGGACACCACGTCACTGATGAGCTTTTCAATCGTGTGGTTCAACAGATCTCAGACAGATGGGAAGAACTGGATTCCAAATATAGGGACAAAACTCAAATGCTTCTTGTTTTGAGGCGAAAAGAGCTTCTTAAGTAG 1191 0.4542 MAASLEDHHQALSINGENNHHEKQIVRALPTIGGCGKHSHSRNSYLQRQSSSLERKKIEEEIFKKLDVKKLASSSNNTIRIADLGCATGPNAFFHTHYILEAIKHKFKTQQTTNTTTSSITNIIIMPTFQVFFNDLPSNDFNTLFTTLPEDREYFAAGVPGSFYGSLFPESSIHLAYTVQAHHFLSKAPEVLQEKGSGAWNKGRVHYTSASKEVVEAYKWQFSEDARKFLEARAREIVGGGMLVILMQGVPNGMPHSEIPIGMVYDCMGSILKDMASEGLLDESKLDSFNLPYYAPSPEEMTKLIEANGSFTIERTELTDPAPWLMRTSDVSISEWIAHVRAAMEAVFTTHFGHHVTDELFNRVVQQISDRWEELDSKYRDKTQMLLVLRRKELLK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1939 396 Gene3D - 33 373 IPR042086 -
Dere13g1939 396 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 33 370 IPR005299 GO:0008168
Dere13g1939 396 Pfam SAM dependent carboxyl methyltransferase 72 391 IPR005299 GO:0008168
Dere13g1939 396 Gene3D Vaccinia Virus protein VP39 43 323 IPR029063 -
Dere13g1939 396 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 392 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1939 Dere-ChrDere13 26418926 26422678 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1939 13 26418926 26422678 Dere13g1939 13 26418926 26422678 ECH