Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1938 ATGAGGGTGGACAGAAAATCTAAAGAGTTGGCATTTAGGATGGGTAGGACAATTGAGCTGTACGGATTCCCTTCCAGTGTTTCTGCCTCTGAAGTAAAATCATTTGTAGAGGAGTATACCGGTAAAGATACTGTTTATGCTATTAAGATAAGGGTAGGCAAAGGCCGTGTTGCAAGAGTATATGCTCATATTCAATTCAAAGATGCAAAGAATGCTTCATACATTAATTCCTTTCCTAGCAAGTCCTTATGCTATGGTGAATGCTATCTAAAAGCTCGGACATTGGAAAAAGATATTGTGCCGAATCCAATGACTTTTTGGCATAGCTTGAAGGATGTGAAACTGCATTTTGGCTGTCAGATCTCAAAGGAAAGATTCTCTGTTTTATGGGAAACAGGGACTAAGGAAGTAAACTTTGGGATTGGAATGAGAAAGTTACAGTTCCTTCTGTCCTATAAAGCAGTGCAATATAAACTTGAGCTTTCATATGAGAATATTTGGCAGATTGAGCTGCATCGCCCACATGGTGATATTGCAGGGTATCTTCTGATTCAGTTACTTGGTGCTCCTCGAGTATTTAAGAATGACGTACGTACTTCAGGAAGCGTATTTGAAGATCCTTTGTTGAACTATTGTGAAAATATGTCTGATGATCAATGGATCCGGGCAACAGATTTCACTCCTTTCAGTTGTATTGGGCAGTCTTCTACTTTATGCTTGGAGCTTCCTTCTGGTGAACATCTTCCAAATTTCAGGGAAAACTTTGCTTATTATAAGGAAAGTGAGGGGAGATACACTTTAGAGTCGGGATTTCCTTTTTCCAGTAACTTGGATCTAGTTCCCATTGTTGCTCCTCCTCAAGGAATTGCAATACCATATGACATCCTGTTTAAAGTTAACTCATTACTTCAGCATGGGTGTCTTGCAGGTCCAGCGCTTGATAGTGCCTTCTATCATTTAGTTGATCCAAGGAGAATGGACCGTGCTTTTATTGAATATGCTTTAGAGAAAATGTATTATTCAAAGGAATTCTGCTTTGAACCCTCAAGGTGGATGACTGAGCAGTATAGAAAGTATTGTGCATCACAGTACCCCTCTCAGTCACCTGCCATATCATTAGATGATGGCTTGGTATATGTTCGCAGGGTTCAAATTACGCCTTGCAAAGTGTATTTCTGCGGCCCAGAGGTTAATGTCTCAAATCGCGTCCTCCGCGAATTTCATGAGTTCATTGATAACTTTCTACGTGTTTCATTTGTTGATGAGGAGTTGGATAAACTGTTTTCAACAGATTTATCTCCGCGTACATCTTCAATTGAGCACAGAAAAACTGAGATCTATACAAGAATTCTTTCTATTCTTAGAAATGGCATAGAAATTGGTGATAAGAAGTTTGAATTTCTAGCATTCTCATCAAGTCAATTGCGGGAGAATTCTTTATGGATGTTTGCTCCTACAACATGTGGACTTAATGCTGCTGCCATAAGAGATTGGATGGGAAATTTTTGCAAGATTAGAAATGTTGCTAAATATGCTGCTAGGCTGGGGCAGTCCTTTGGTTCATCTACTGAAACTTTGAGTGTTGACCAGGATGAAATTGAAATTATTCCTGATGTGAAGGTTAAACGTGGTAAAATTAACTATGTTTTCTCTGATGGAATTGGGAAGATATCTGCTGAATTTGCTAGGAATGTGGCTATAAAATGTGGCTATAAATCATTGACTCCATCGGCCTTTCAGATTCGATATGGGGGTTACAAAGGAGTTGTGGCTGTTGACCCAACATCATCAGTGAAATTATCACTGAGGAAGAGCATGCTCAAGTATGAATCGAATAATACAAAACTAGATGTCTTGGCGCGTAGTAAATTCCAGCCTTGTTATCTAAATCGACAGTTAATTACTCTCTTATCTACTCTTGGGATCCCGGATCATGTTTTTGAGAAGAAACAAAAAGCAGCTATAAATCAACTGAACTCTTTACTAACAGATTCATTAAGGGCGCAAGAGGCTCTGGACTTGATGTCTCCTGGGGAGATATCTAATATTCTAAAGGAGATGCTCATTTGTGGCTATAAGCCTTATTCTGAACCTTTTCTTTCGATGATGCTGGAAACATTTAGGGCATCAAAACTGTTGGAATTGCGACTCAAAACTAGAATTTTTGTTCCAGATGGAAGAGCAATGATGGGATGTCTAGATGAAACCAGAACCTTGAAATATGGTCAAGTATTTGTGCAATGTTCTAATAACAGATTCATAGAGCTATCTAATAGTTCTGTTGTGTGTGGCAATGAGGGGTGTTATATAGTCACAGGTAAGGTAGTTGTTGCAAAGAACCCATGCTTGCATCCAGGTGATGTGCGTGTTTTAAAGGCTGTTAATGTGCCAGCTCTGCACCACATGGTCGATTGTGTTGTTTTCCCTCGAAAGGGATATAGACCTCATCCTAACGAATGTTCGGGAAGTGATCTGGATGGAGACATCTACTTTGTTTGTTGGGACCGTGAATTAATTCCACCTGATCAGGTCTGGCCAATGAATTATACTCCTGCCCCAAGTATGCAGTTGGATCATGATGTCACGATAGAGGAGGTTGAAGAGTATTTTGTCAACTATATAGTCAATGACAGTCTAGGAATAATTGCCAATGCCCACACCGTCTTTGCAGATAGAGAGCCCTTAAAAGCAAAGGCTGGACCTTGTACTGAGCTTGCCAAGCTATTTTCAATTGCTGTTGACTTTCCTAAAACTGGTGTCCCGGCTGTCATACCTCCTGAACTTTATGTCAAAGAATATCCAGACTTCATGGAGAAGCCAGATAAACTGACATATGAATCAGTCAATGTGATAGGAAAGCTTTTCAGGGAAGTGATAGAAATTGCACCAAGCGCTAGCTCCACTTCAGTCTTCACTCAGGAAGTGGCAAGACAGTCGTATGACTCTGATATGGAAGTTGATGGCTTCATGGATTATGTTGATGATGCTTTTTATTACAAAAGCAACTATGACAACAAGTTGGGGAATTTGATGGATTACTATGGGATCAAGACTGAGGCCGAAATCCTGAGTGGGAATATTATGAAACTGTCAAAATCTTTCACAAAAAGAAGGGATGCAGATGCAGATGCAATCAAGGTGGCTGTGAGGTCCCTAAGGAAAGAAGCTCGGACCTGGTTCAATGGCAGTGGAAGTGCCGAAGATTCTGGGTATGACAATCTGCAAGCGAAAGCATCTGCTTGGTACCATGTTACCTACCATCCAAGTTATTGGGGTTGCTACAATGAAGGTATGGGTCGGGATCATTTTCTAAGCTTTGCATGGTGTGCTTATGATAAGCTTGTCACAATCAAGAAGGAGAAAGCCAGCATTAGATGGGCTCTTCAACTATCTTCCTTGGATCGCAAGTTTAGTCAAGGGCTGTGTTTGTATTGA 3435 0.4038 MRVDRKSKELAFRMGRTIELYGFPSSVSASEVKSFVEEYTGKDTVYAIKIRVGKGRVARVYAHIQFKDAKNASYINSFPSKSLCYGECYLKARTLEKDIVPNPMTFWHSLKDVKLHFGCQISKERFSVLWETGTKEVNFGIGMRKLQFLLSYKAVQYKLELSYENIWQIELHRPHGDIAGYLLIQLLGAPRVFKNDVRTSGSVFEDPLLNYCENMSDDQWIRATDFTPFSCIGQSSTLCLELPSGEHLPNFRENFAYYKESEGRYTLESGFPFSSNLDLVPIVAPPQGIAIPYDILFKVNSLLQHGCLAGPALDSAFYHLVDPRRMDRAFIEYALEKMYYSKEFCFEPSRWMTEQYRKYCASQYPSQSPAISLDDGLVYVRRVQITPCKVYFCGPEVNVSNRVLREFHEFIDNFLRVSFVDEELDKLFSTDLSPRTSSIEHRKTEIYTRILSILRNGIEIGDKKFEFLAFSSSQLRENSLWMFAPTTCGLNAAAIRDWMGNFCKIRNVAKYAARLGQSFGSSTETLSVDQDEIEIIPDVKVKRGKINYVFSDGIGKISAEFARNVAIKCGYKSLTPSAFQIRYGGYKGVVAVDPTSSVKLSLRKSMLKYESNNTKLDVLARSKFQPCYLNRQLITLLSTLGIPDHVFEKKQKAAINQLNSLLTDSLRAQEALDLMSPGEISNILKEMLICGYKPYSEPFLSMMLETFRASKLLELRLKTRIFVPDGRAMMGCLDETRTLKYGQVFVQCSNNRFIELSNSSVVCGNEGCYIVTGKVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPRKGYRPHPNECSGSDLDGDIYFVCWDRELIPPDQVWPMNYTPAPSMQLDHDVTIEEVEEYFVNYIVNDSLGIIANAHTVFADREPLKAKAGPCTELAKLFSIAVDFPKTGVPAVIPPELYVKEYPDFMEKPDKLTYESVNVIGKLFREVIEIAPSASSTSVFTQEVARQSYDSDMEVDGFMDYVDDAFYYKSNYDNKLGNLMDYYGIKTEAEILSGNIMKLSKSFTKRRDADADAIKVAVRSLRKEARTWFNGSGSAEDSGYDNLQAKASAWYHVTYHPSYWGCYNEGMGRDHFLSFAWCAYDKLVTIKKEKASIRWALQLSSLDRKFSQGLCLY 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1938 1144 Pfam RNA dependent RNA polymerase 385 958 IPR007855 GO:0003968
Dere13g1938 1144 PANTHER RNA-DEPENDENT RNA POLYMERASE 16 1121 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1938 Dere-ChrDere13 26380696 26388796 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1938 13 26380696 26388796 Dere13g1938 13 26380696 26388796 ECH