Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1936 ATGGGGGAAGGACAAGAATTTGCACTGACCCAGATGAGGAAATCGGTTGAGAAGCTTGGTTCTTCTACAGAGATGCATGGGGAACCAACACTCATGAGGTTCTTGATAGCTCGATCAATGGACCCACATAAAGCAGCTAAGATGTTTGTTCAGTGGCAGAAGTGGAGGACTAAGATGGTGCCTAATGGCTTCATTTCACAATCTGAAATTCCAGATGAATTGGAAGGGAGAAAAGTCTTTTTGCAGGGTTTGTCCAAGGATAAGTACCCTGTGATGATCTTGCAAGCAAGGAAGCATTTTCCTTCCAAGGATCAGATTCAATTAAAGAAATTTGTTGTTCATATACTAGACAAGACAATTGCAAGTGGTTTCAAAGGAAGGGAAATAGGAAATGAGAAGTTGATTGGGATTCTTGATCTGCAGCATATCACATATAATAACATTGATGCACGTGGGTTAATTACTGGATTTCAATTTTTACAGGCTTACTATCCTGAACGTCTAGCAAAGTGCTACATATTACACATGCCGCAGTTTTTTGTGAGCGTCTGGAGACTAGTTTCTCGCTTCCTAGAGAAAGCAACATTGCAAAAGATTGTAATAGTTAGCAATGAGGCTGAGAGAAGAGAGTTTGTAAAAGAGGTAGGAGAAGATATTCTCCCAGAAGAGTATAGTGGAGGAGCAAAGCTTGTAGCTCTCCAAGATGTTGTATTGACGCCATTAGAGAATGGACCAACTGATTGA 744 0.4073 MGEGQEFALTQMRKSVEKLGSSTEMHGEPTLMRFLIARSMDPHKAAKMFVQWQKWRTKMVPNGFISQSEIPDELEGRKVFLQGLSKDKYPVMILQARKHFPSKDQIQLKKFVVHILDKTIASGFKGREIGNEKLIGILDLQHITYNNIDARGLITGFQFLQAYYPERLAKCYILHMPQFFVSVWRLVSRFLEKATLQKIVIVSNEAERREFVKEVGEDILPEEYSGGAKLVALQDVVLTPLENGPTD 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1936 247 CDD SEC14 79 226 IPR001251 -
Dere13g1936 247 SUPERFAMILY CRAL/TRIO N-terminal domain 3 64 IPR036273 -
Dere13g1936 247 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Dere13g1936 247 PANTHER OS03G0850700 PROTEIN 3 236 - -
Dere13g1936 247 Pfam CRAL/TRIO domain 75 226 IPR001251 -
Dere13g1936 247 SUPERFAMILY CRAL/TRIO domain 69 229 IPR036865 -
Dere13g1936 247 Gene3D - 1 235 IPR036865 -
Dere13g1936 247 SMART sec14_4 72 229 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1936 Dere-ChrDere13 26317222 26344457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1936 27 232 Acyl Lipid Metabolism Gene Families AT1G55840 24.779 7.66e-13 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1936 13 26317222 26344457 Dere13g1936 13 26317222 26344457 ECH