Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1908 ATGGCTTCCTCTCTAAGCAACAATCAAGACGGAGCAGTTGCTGGCAAACCCACTCCGCTTGAAAACGTTCTGCAAAAGCACGTTTCCTTCTTTGACAGAAACCGAGACGGCGTCGTTTATCCGTGGGAGACTTTTCAAGGGTTTCGCGCAATCGGTTGCGGAATCTTCTTGTCCACCGCAAGTGCACTTCTCATCAATTTGACTCTCAGTCAGAAAACTCGCCCAGGAAAATTTCCTTCTCCGTTGCTACCAATTGAAGTTAAAAACATCCAAAGAGCCAAACATGGCAGTGACTCTGGTGTTTATGATACGGAAGGAAGGTTTGTTCCACAGAAGTTTGAAGAAATTTTCAGCAAGCATGCAAGATCACACCCAAATGCTTTAACATCTGATGAACTGATGGCCATGCTCAAGGCAAACAGAGTTCCCAAGAATTACTTTGGATGGTTTGCAAGCTACACAGAGTGGAAGCTGTTGTATGATCTTGGGAAAGACAATAATGGTTTATTGCACAAAGAAACAATTCGAGGTGTTTATGATGGGAGTTTGTTTGAACAGATGGAGAAAGAACACTCATCGGAGAAAAATATGTAA 594 0.431 MASSLSNNQDGAVAGKPTPLENVLQKHVSFFDRNRDGVVYPWETFQGFRAIGCGIFLSTASALLINLTLSQKTRPGKFPSPLLPIEVKNIQRAKHGSDSGVYDTEGRFVPQKFEEIFSKHARSHPNALTSDELMAMLKANRVPKNYFGWFASYTEWKLLYDLGKDNNGLLHKETIRGVYDGSLFEQMEKEHSSEKNM 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1908 197 PANTHER PEROXYGENASE 3-RELATED 21 194 IPR007736 -
Dere13g1908 197 Pfam Caleosin related protein 22 187 IPR007736 -
Dere13g1908 197 SUPERFAMILY EF-hand 24 173 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1908 Dere-ChrDere13 25987983 25993081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1908 1 194 Acyl Lipid Metabolism Gene Families AT1G70670 62.051 6.50e-84 245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1908 13 25987983 25993081 Dere13g1908 13 25987983 25993081 ECH