Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1645 ATGTGGTTATATTTGAGAAATCTTGGAAACAAAATGTCTAATGTTGATGAACCACTATATCCAATCGCGGTGCTTATAGACGAGCTGAAAAATGATGACATCCAGCTACGCTTGAACTCAATTCGCAAACTATCAACAATTGCACGTGCTCTTGGGGAGGAGCGAACTCGTAAGGAATTAATTCCGTTTCTGAGTGAGAATAATGATGATGATGATGAGGTGCTTCTTGCAATGGCGGAAGAGTTGGGAGTTTTCATTCCTTATGTTGGAGGAGTGGAACATGCCAATGTGTTACTCCCACCTTTGGAGACGCTTTGCACTGTTGAGGAAACCTGTGTAAGAGACAAAGCTGTGGAGTCTCTTTGTAGAATTGGATCTCAAATGAGGGAGAGCGATTTGGTTGACTGGTTTATCCCTTTGGTGAAGAGATTGGCAGCAGGTGAATGGTTTACTGCCAGAGTCTCTGCTTGTGGACTATTTCATATTGCATACCCAAGTGCACCAGAAACCTCAAAGACAGAGCTGAGGTCAATATACAGTCAATTGTGTCAAGATGACATGCCTATGGTTAGAAGGTCTGCTGCATCAAATCTTGGGAAATTTGCAGCAACTGTTGAATATGCTCATCTGAAGGCAGATGTCATGTCAATTTTTGAGGATCTTACTCAAGATGATCAAGACTCTGTTAGATTGTTGGCTGTGGAGGGCTGTGCCGCCCTTGGTAAGCTGTTGGAACCTCAAGATTGTGTTGCACATATACTCCCAGTTATTGTTAACTTTTCTCAGGATAAGTCTTGGCGTGTCCGTTACATGGTTGCTAATCAATTATATGAGCTCTGTGAAGCCGTAGGCCCTGAACCTACCAGAACGGAATTGGTCCCTGCATATGTGCGGTTGCTACGAGACAATGAAGCTGAAGTACGTATAGCAGCTGCTGGAAAAGTCACCAAGTTTTGCAAAATTTTAAATCCAGAACTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGAATTGTCATCAGATTCTTCACAGCATGTCCGTTCTGCTCTGGCTTCAGTAATAATGGGAATGGCTCCTGTGTTGGGAAAGGATGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTCCCTTCTAAAGGATGAATTTCCTGATGTGCGCCTGAACATTATCAGCAAGCTTGATCAAGTGAATCAGGTTATTGGAATCGATCTGTTATCTCAATCTTTGTTACCAGCCATTGTTGAGCTGGCTGAGGATAGGCATTGGAGAGTTCGGCTTGCAATAATAGAGTATATACCTTTATTGGCAAGTCAACTGGGTGTAGGATTTTTTGACGACAAGCTTGGTGCTCTTTGCATGCAGTGGTTACAGGATAAGGTTCACTCAATTCGTGATGCAGCTGCTAACAACTTGAAGCGGCTTGCAGAAGAATTTGGTCCTGAGTGGGCTATGCAGCACATAATTCCACAGGTTTTGGAGATGATCAATAATCCACACTATTTGTATAGGATGACCATTCTTCGAGCTATCTCTCTGCTTGCTCCAGTAATGGGTGCTGAAATTACTTGCTCAAAATTGTTGCCTGTCGTTATTGCTGCATCGAAAGACAAAGTTCCCAACATAAAGTTCAATGTGGCGAAGGTGTTAGAGTCAATCTTCCCCATAGTTGATCAGTCTGTGGTGGAAAGTACAATTCGTCCATGTCTGGTTGAGCTCTGCGAGGATCCTGATGTTGATGTACGATATTTTTCCAACCAAGCACTTCAAGCAATTGATCATATCATGATGTCTAGCTAG 1797 0.4279 MWLYLRNLGNKMSNVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPETSKTELRSIYSQLCQDDMPMVRRSAASNLGKFAATVEYAHLKADVMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCKILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIRDAAANNLKRLAEEFGPEWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGAEITCSKLLPVVIAASKDKVPNIKFNVAKVLESIFPIVDQSVVESTIRPCLVELCEDPDVDVRYFSNQALQAIDHIMMSS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 565 598 IPR021133 -
Dere13g1645 598 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 13 592 - -
Dere13g1645 598 SUPERFAMILY ARM repeat 19 591 IPR016024 -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 175 213 IPR021133 -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 253 291 IPR021133 -
Dere13g1645 598 Pfam HEAT repeats 372 472 - -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 487 525 IPR021133 -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 526 564 IPR021133 -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 214 252 IPR021133 -
Dere13g1645 598 Gene3D - 12 594 IPR011989 -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 331 369 IPR021133 -
Dere13g1645 598 Pfam HEAT repeat 253 281 IPR000357 GO:0005515
Dere13g1645 598 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 14 596 - -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 448 486 IPR021133 -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 21 59 IPR021133 -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 409 447 IPR021133 -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 370 408 IPR021133 -
Dere13g1645 598 ProSiteProfiles HEAT repeat profile. 292 330 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1645 Dere-ChrDere13 22348689 22353520 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1645 13 22348689 22353520 Dere13g1645 13 22348689 22353520 ECH