Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1605 ATGGAAAGCATCAAGACTATGATTAGTCATGTGATTTTTGCTCTCTTTATTTGCTATCTGGGTGCAAGTTGTTTTGGACAAGTAGAGCTTGATTTAGCTCCAATGGAGAAGAGAGAGCAGGAAGCTCTATACTCTACCATACAAGGCTTTGTTGGTAATTGGTGGAAGGGCTCAGATCTCTATCCGGATCCTTGTGGGTGGACTCCCATTCAGGGGGTCTCCTGTGATCTGTATGACGGGTTTTGGTATGTTACTGCCTTGAACATTGGACCCATTCATGAAAATTCTCTATCTTGTTGCCAGAATTTAGAATATAGGCCACAGTTGTTTGAATTTAAGCACCTAAAATCTCTATCCTTCTTCAACTGCTTTTTATCAAGAGACAAGCATCCAGCTACTATCCCTACTGGAAGTTGGGAGAAACTTTCTGGAAGTCTAGAATCACTAGAGTTTCGATCAAATCCAGGTCTCATTGGAAAAATCCCTAAAAGTTTTGGTGTCCTCAAGAACCTCCAATCTCTGGTATTACTGGAAAATGGTTTAACAGGGGAAATACCACCAGACATTGGCAATCTTATCAAGCTGAAGAGGCTTGTTCTTGCTGGGAACTCTTGCGGTGGGCAGATTCCAGATATTTTTGGTGGGTTAAATGAGTTACTCATCTTGGATTTAAGTAGAAATGCACTGTCTGGATCATTGCCTTTCACTCTTGGAAGTTTAACTTCATTATTGAAGCTTGATTTAAGCAACAATAATTTAGAAGGCAATCTGCTAAAAGAGTTCGCTGATCTTAAGAATCTGACCCTTATGGACCTAGGAAATAACAGATTTTCAGGTGGATTTGTGTTTTCTATTCAAGAGATGTATTCCTTGGAAGAAATGGCCTTATCAAACAATCCAATTGGTGGAAGCATCAGGGGCCTAAAGTGGGAAAACCTTCAGAACCTGGTCATTTTGGAACTCTCTAACATAGGATTGACAGGGGAAATTCCTGAGTCCATATCAGAGTTGAAGAGATTGAGGTTTCTAGGTCTTCGTAACAACAACCTCACAGGCAACCTTTCACCAAAGCTAGCAACTCTTCCTTGTCTCAGTGCACTGTACCTAAATGGAAACAATCTGACAGGAGACCTTAAATTCTCTGAACAGTTTTATGGCAAAATGGGAAGACGTTTTGGGGCCTGGGACAACCCCAACCTTTGCTACCCAGTTGGAGAAATATCAACAAGCCATGTTCCATATGGGGTAAAACCATGCCAGAAAGAGGTCAAGTTGCTAGAAATTGATACAAAACCTAAGCTGCTAAATGGGGATATGAATCAGACTTCCCAACTCATGGCCTCTTTGGGATTTTCAAGCTATGCTACCAATGGATTCTGGTGTACTTTTCTGGTAGAGTTATGGATAATGGGTCTATTCCTAACCTCTCATATGACTCTTTAA 1443 0.4096 MESIKTMISHVIFALFICYLGASCFGQVELDLAPMEKREQEALYSTIQGFVGNWWKGSDLYPDPCGWTPIQGVSCDLYDGFWYVTALNIGPIHENSLSCCQNLEYRPQLFEFKHLKSLSFFNCFLSRDKHPATIPTGSWEKLSGSLESLEFRSNPGLIGKIPKSFGVLKNLQSLVLLENGLTGEIPPDIGNLIKLKRLVLAGNSCGGQIPDIFGGLNELLILDLSRNALSGSLPFTLGSLTSLLKLDLSNNNLEGNLLKEFADLKNLTLMDLGNNRFSGGFVFSIQEMYSLEEMALSNNPIGGSIRGLKWENLQNLVILELSNIGLTGEIPESISELKRLRFLGLRNNNLTGNLSPKLATLPCLSALYLNGNNLTGDLKFSEQFYGKMGRRFGAWDNPNLCYPVGEISTSHVPYGVKPCQKEVKLLEIDTKPKLLNGDMNQTSQLMASLGFSSYATNGFWCTFLVELWIMGLFLTSHMTL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1605 480 PRINTS Leucine-rich repeat signature 219 232 - -
Dere13g1605 480 PRINTS Leucine-rich repeat signature 240 253 - -
Dere13g1605 480 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 107 377 - -
Dere13g1605 480 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Dere13g1605 480 FunFam Piriformospora indica-insensitive protein 2 38 209 - -
Dere13g1605 480 FunFam Piriformospora indica-insensitive protein 2 307 409 - -
Dere13g1605 480 Gene3D Ribonuclease Inhibitor 309 388 IPR032675 -
Dere13g1605 480 Gene3D Ribonuclease Inhibitor 36 308 IPR032675 -
Dere13g1605 480 FunFam Piriformospora indica-insensitive protein 2 210 306 - -
Dere13g1605 480 SUPERFAMILY L domain-like 49 379 - -
Dere13g1605 480 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1605 Dere-ChrDere13 21890303 21892419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1605 82 459 Receptor kinase-like Gene Family AT4G08850 30.673 1.43e-36 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1605 13 21890303 21892419 Dere13g1605 13 21890303 21892419 ECH