Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1601 ATGGCCGACAACACAGACGATATAGCAGAGGAAATCTCGTTCCAGAGCTTCGATGACGACTGTAAGTTGCTCGGCAATCTGCTCAACGACGTTCTGCAGCGAGAAGTTGGTAGTACGTTCATGGAGAAGCTGGAAAAAATCCGAGTTCTTGCTCAGAGTGCTTGTAATATGAGACAGGCAGGGATTGAGGACATGGCAGAGCTGCTCGAGAAGCAGTTGGCTTCAGAGTTATCGAAGATGACGTTAGAAGAAGCTCTCACTCTCGCTCGTGCCTTCAGCCATTATCTTACTTTGACGGGTATAGCTGAAACCCATCACAGGGTTCGTAAAGGACGGAATGTAGCAAATTTATCAAAATCTTGTGATGACACCTTTAGCCAGCTGGTGCAGAGTGGAGTTTCCCCAGATGAGCTTTATAACACAGTTTGCAAGCAGGAGGTTGAAATTGTTCTTACAGCCCATCCCACACAAATTAATCGCCGTACTTTACAATACAAGCACATCAGAATTGCTCACCTTTTGGATCTTAATGATCGACCTGATCTTAGTCTTGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAGCTTAGGCGTCAAAAGCCCACTCCAGTTGATGAGGCTAGGGCTGGTTTGAATATTGTGGAGCAATCACTCTGGAAAGCGGTCCCTCATTATTTACGTAGAGTCAGCAATGCACTAAAGAAGCATACAGGAAAGCCACTTCCATTAACCTGTACCCCTATAAAGTTTGGATCTTGGATGGGGGGTGATAGAGATGGAAACCCAAACGTGACGGCAAAGGTCACAAAAGACGTTACACTTTTATCAAAATGGATGGTGATTGACCTCTATTTCCGCGAAGTTGATAACCTCAGATTTGAGCTGTCTATGAATCAGTGCAGTGATAGGCTGTCAAGGCTGGCACATGAAATTCTGGAACAAGAAGCTTTATTTGAGGACCGCCACGAGAGTTGGAATCAATCTCTGAGTAGAAGTCAATTCAAACATCATGGTCAACAAGCTCCACTTCCAACACAACTTCCAGCTAGAGCTCATTTACCCTCATGTGCTGAAAATGGTGAGTCTCAGTATCCAAGATTGGATATTCCGGGTAAAGATTACATGCCACTCAATCACAAGGATGGTGAGATTTCTTCTAGTTCAACAATGTTCGACTGTCACAATCATAATAGTCATGCATCACTAACAAATTCAGAAAATTCTAGCACTTCTCAAGCACCTACAAATCCACGTGCTAGTCAACTACTTGGTCAGAGGAAATTATATACAGAATCACAGACAGGAAGGTCCAGTTTCCAGAAGCTTTTGGAGCCAATGCTCCCGCAACTTCCTGGAATTGCTCCTTACAGGGTTGTCCTTGGGAATGTAAAAGATAAGCTTCTGAAAACTCGCAGACGGTTGGAGCTTCTTCTTGAGGATAATTCATGTGACTATGATCCTTTGAGTTATTATGAAACGACTGATCAACTTTTGGAGCCTCTGCTCCTGTGTTATGAATCTCTGCAATCATGCGGATCTGGGGTGTTAGCTGATGGTCGACTTGCTGACCTAATTCGAAGGGTTGCTACCTTTGGAATGGTGTTGATGAAGCTTGACTTGCGTCAGGAATCTGGCAGACATGCTGAAACACTTGATGCAATCACCAAGTATTTGGATTTGGGAACTTACAGCGAATGGAGTGAAGATAAGAAACTGGACTTCTTAACGCGAGAGCTGAAAGGGAAGAGGCCGCTGGTTCCTTCCAATATAGAAGTTGCTCCTGATGTTAAAGAAGTCTTGGACACCTTCCGAGTTGCGGCTGAGCTAGGGAGTGATTCACTTGGGGCCTATGTGATCTCGATGGCTTCCAATGCGAGTGATGTTCTTGCGGTGGAGCTTCTACAGAAAGATGCTCGGCTTGCTGTTAGTGGGGAGTTGGGAAGAGCATGTCCTGGTGGAACGCTGCGGGTGGTTCCTCTATTTGAAACTGTGAAGGACCTGAGAGGAGCTGGTTCAGTTATCCGAAAACTTTTATCAATTGATTGGTACCGTGAACACATCATTAAGAACCATAATGGGCATCAAGAGGTTATGGTTGGATATTCTGATTCTGGTAAAGATGCTGGGCGATTCACTGCTGCTTGGGAACTTTACAAAGCTCAAGAGGATGTTGTAGCTGCTTGCAATGAGTATGGCATTAAGGTTACTCTGTTCCATGGCCGTGGAGGGAGTATTGGTCGTGGTGGAGGGCCCACATATTTGGCTATTCAGTCCCAGCCACCTGGCTCTGTGATGGGAACCCTTCGTTCCACTGAGCAGGGAGAGATGGTACAGGCAAAGTTTGGATTGCCCCAGACAGCTGTGAGACAGCTTGAGATATACACAACAGCTGTGCTACTTGCAACCCTTCGCCCACCTCTCCCACCCCGAGAAGAAAAGTGGCGTAATCTCATGGAAGATATCTCGAATATCAGCTGCCAATGTTACCGAAACGTAGTATATGAGAATCCAGAATTTCTTGCCTACTTCCATGAAGCCACACCTGAAGCAGAGCTTGGCTTCCTTAACATAGGAAGCCGCCCCTCAAGAAGAAAGAGCTCAATAGGAATTGGACATCTGCGCGCCATACCATGGGTGTTTGCATGGACTCAAACCAGATTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGTTTAAAAGGTGCTTGTGAGGAAGGACACACTGAAGAGCTAAAAGCCATGTACAAAGAGTGGCCTTTCTTTCAATGTACAATAGACCTTATTGAGATGGTTCTGGGGAAAGCAGACATTCCTATAGCTAAGCACTATGATGAAGTCCTTGTGTCAGAAAAGAGGCGAGAGCTTGGTCGTGATCTAAGGGCAGAACTCACAACAACAGAGAAGTTTGTACTGGTTGTTAGTGGACATGAGAAACTTCAGCAGAACAATAGGAGCTTAAGGAGGCTAATTGAGAATAGACTTCCCTTTCTAAATCCCATGAACATGTTGCAGGTGGAGATACTTAAGAGGCTTAGACGTGATGATGACAACCATAAAATCAGAGATGCTTTGCTTATCACGATAAATGGGATTGCTGCTGGGATGAGGAATACTGGTTAA 3153 0.4513 MADNTDDIAEEISFQSFDDDCKLLGNLLNDVLQREVGSTFMEKLEKIRVLAQSACNMRQAGIEDMAELLEKQLASELSKMTLEEALTLARAFSHYLTLTGIAETHHRVRKGRNVANLSKSCDDTFSQLVQSGVSPDELYNTVCKQEVEIVLTAHPTQINRRTLQYKHIRIAHLLDLNDRPDLSLEDREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVTLLSKWMVIDLYFREVDNLRFELSMNQCSDRLSRLAHEILEQEALFEDRHESWNQSLSRSQFKHHGQQAPLPTQLPARAHLPSCAENGESQYPRLDIPGKDYMPLNHKDGEISSSSTMFDCHNHNSHASLTNSENSSTSQAPTNPRASQLLGQRKLYTESQTGRSSFQKLLEPMLPQLPGIAPYRVVLGNVKDKLLKTRRRLELLLEDNSCDYDPLSYYETTDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAETLDAITKYLDLGTYSEWSEDKKLDFLTRELKGKRPLVPSNIEVAPDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPLPPREEKWRNLMEDISNISCQCYRNVVYENPEFLAYFHEATPEAELGFLNIGSRPSRRKSSIGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEEGHTEELKAMYKEWPFFQCTIDLIEMVLGKADIPIAKHYDEVLVSEKRRELGRDLRAELTTTEKFVLVVSGHEKLQQNNRSLRRLIENRLPFLNPMNMLQVEILKRLRRDDDNHKIRDALLITINGIAAGMRNTG 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1601 1050 MobiDBLite consensus disorder prediction 389 436 - -
Dere13g1601 1050 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1050 IPR022805 GO:0006099|GO:0008964|GO:0015977
Dere13g1601 1050 MobiDBLite consensus disorder prediction 392 436 - -
Dere13g1601 1050 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 708 720 IPR033129 -
Dere13g1601 1050 Pfam Phosphoenolpyruvate carboxylase 19 338 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere13g1601 1050 Pfam Phosphoenolpyruvate carboxylase 464 1050 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere13g1601 1050 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 17 1050 IPR015813 GO:0003824
Dere13g1601 1050 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Dere13g1601 1050 FunFam Phosphoenolpyruvate carboxylase 4 424 544 - -
Dere13g1601 1050 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere13g1601 1050 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere13g1601 1050 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere13g1601 1050 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1050 IPR021135 GO:0006099|GO:0008964|GO:0015977
Dere13g1601 1050 Gene3D Phosphoenolpyruvate/pyruvate domain 289 370 - -
Dere13g1601 1050 Gene3D Phosphoenolpyruvate/pyruvate domain 395 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1601 Dere-ChrDere13 21832586 21841270 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1601 13 21832586 21841270 Dere13g1601 13 21832586 21841270 ECH