Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1587 ATGGCGATGGCGATGGCGATTACTTCACCAACTCGTGGCGTTGCATATTTGCGTCGGTCTTTGCCTTCTCGCTCCATTCTTACAACGGAACTCATTTCCTTCAGCGGAGCACCGGGTCCGAGACTTGTGTCGGTTCGGTCTCAGACACAAACTTCAGATGGGTTCGGATCCAATAGACGGGTCAGCGTGGACGATTCTGATAACTCAATTGGGTTCTCAAGTTCACCTTCCTCCTCCTCCTCCTCCTCCTCAGTTATTGATTTTCTTACGTTATGCAATCGGCTTAAGACCACCAAAAGGAAAGGATGGATCAATCATGGGATAAAGGGTCCTGAATCTATTGCTGACCATATGTATCGCATGGCTCTAATGGCATTGATTGCTGTGGATCTTCCTGGATTGAATAGAGAAAGATGTATTAAAATAGCACTTGTGCATGATATTGCAGAAGCTATCGTTGGAGATATAACACCTTCTGATGGTGTGCCCAAGGCAGAGAAGACCAGAAGGGAGCAGGAAGCTTTGAATCAAATGTGTGAGGTTCTTGGTGGAGGGATAAGAGCTGAAGAGATCAAAGAACTTTGGGCAGAGTATGAAAACAATTCCTCTTTAGAGGCTAATCTTGTGAAAGATTTTGACAAGGTTGAAATGATTTTACAAGCACTGGAATATGAAATTGAACACGGAAAGGTGTTGGATGAGTTTTATCTTTCAACTGCAGGTAAGTTTCAGACTGAAATAGGAAAAAATTGGGCAGCTGAGATCATTTCAAGAAGAAAATCTATATTAGCAAAGAGGCTTTCTGGAGTTCTCATCTTAGCTGATGCCTCATCTCAACGTGTTCATATTATTGCAATCAAAGTTCAGTTTCTTAAGCAGTTGCTGCTAGAAAATGGTGATGGCGGCTCTTGCAAAACTGATGGTGACTTTGAAGTCCAAACTGAGGAGTTTGAGGACAAGGAATCCATATCAGAAGATCAGAAAGACAGAAAGCATGAGGATGGAAATGAGACACACAAAGGCTCAGGAATTGATTGCTAA 1041 0.4275 MAMAMAITSPTRGVAYLRRSLPSRSILTTELISFSGAPGPRLVSVRSQTQTSDGFGSNRRVSVDDSDNSIGFSSSPSSSSSSSSVIDFLTLCNRLKTTKRKGWINHGIKGPESIADHMYRMALMALIAVDLPGLNRERCIKIALVHDIAEAIVGDITPSDGVPKAEKTRREQEALNQMCEVLGGGIRAEEIKELWAEYENNSSLEANLVKDFDKVEMILQALEYEIEHGKVLDEFYLSTAGKFQTEIGKNWAAEIISRRKSILAKRLSGVLILADASSQRVHIIAIKVQFLKQLLLENGDGGSCKTDGDFEVQTEEFEDKESISEDQKDRKHEDGNETHKGSGIDC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1587 346 MobiDBLite consensus disorder prediction 321 346 - -
Dere13g1587 346 MobiDBLite consensus disorder prediction 306 346 - -
Dere13g1587 346 Gene3D Hypothetical protein af1432 71 268 - -
Dere13g1587 346 SMART hd_13 110 227 IPR003607 -
Dere13g1587 346 SUPERFAMILY HD-domain/PDEase-like 84 262 - -
Dere13g1587 346 ProSiteProfiles HD domain profile. 114 218 IPR006674 -
Dere13g1587 346 MobiDBLite consensus disorder prediction 46 83 - -
Dere13g1587 346 Pfam HD domain 92 249 IPR006674 -
Dere13g1587 346 PANTHER UNCHARACTERIZED 43 267 IPR039356 GO:0002953
Dere13g1587 346 FunFam HD domain-containing protein 2 73 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1587 Dere-ChrDere13 21613334 21628170 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1587 13 21613334 21628170 Dere13g1587 13 21613334 21628170 ECH