Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1478 ATGTTCCACCTTTCAATGGAGAAAGGGGTGGATGATTGGACAGGACAGGACGAAAGAAGAAGCAACGCCGCAGCAAGCAACAACAATACAGAGTTCAAATCATTGAAGCTACTTATACGAAATATGAGTGAAGATAACGAAGAGAGAAGAAGAAAAGCAATGGAGACTATGTCTTTGCAGATAGACAAGTACCCAAGAGATCTGCTCCAGAGATTCATGTCCAGTGATAATACTGAACAGTCCCAAAACGCAGAGCCTGAGGATGATTCGGAGGAGATTGAGCTAAATCTCGGCCTTTCATTGGGTGGTCGATTCGGTGTCGATAAGCACGCTAAGAAGCTAGTGCGATCATCGTCTATCGTCGGAACAATGCCTCTCGTCAGAGAGAACGAGTCAACAACCCCACCAACGGCGTCCTATCCAACCCTCATGAGGACTTCTTCGCTTCCGACGGAGACTGAGGAGGAATGGAGGAAGAGGAAGGAGTTGCAGACATTGAGGCGATTGGAGGCGAAGAGAAGACGGTCTGAAAAGCAGAGGAGCTCTAAGACGGAGAGAGACGGGGGCAGCGGTGGTGGCGACAGCGGTGAACTTGAGGGCCCAAAGGGAAGGGGATGGGCTTGTGGGTTGCCCAGCTGGGCTTCAACAACAGCTGGGCAAGTGGTTCTTAGTGATGTGTTGGACAAAGGAAAGGACCATGGCCTTTTGGGTCGGCCTGCTAGTTTCCAGGGGGGAAGCTCGTGGGGAATGCCGGAAATGGGGAGCAATCCTTTTCAAGGATCAAGTAATTGTGGTGAAGCAGAAAGCCCTGCTAGTAATCAGTTGCTGCAGGAAAGGAGCAATCAGGATGCTGTGGGTTCCTCAGGGTCAAAGACAAATGAGAATATGATCAATATATCCAATGAGGTGGTGACTTCATCAAAGAAGCCACATCCTGCCCAAAATAGAAGGAGGGGAATTGGGTCGAACTCAATGGAAGACATGCCTTGTGTTTTTACGCAAGGGAGTGGCCCTAATGGAAGAAGAATTGAGGGAATCTTATACAGATATGGTAAAGGGCAGGAAGTGAGGATAATGTGTGTATGTCATGGAAACTTTCTGTCTCCAGCAGAGTTTGTGAAGCATGCTGGTGGTGGTGATGTCGCTCATCCACTAAGGCACATAGTTGTAAACCCTTCCTCTACTCCCTATTTGTAA 1197 0.4862 MFHLSMEKGVDDWTGQDERRSNAAASNNNTEFKSLKLLIRNMSEDNEERRRKAMETMSLQIDKYPRDLLQRFMSSDNTEQSQNAEPEDDSEEIELNLGLSLGGRFGVDKHAKKLVRSSSIVGTMPLVRENESTTPPTASYPTLMRTSSLPTETEEEWRKRKELQTLRRLEAKRRRSEKQRSSKTERDGGSGGGDSGELEGPKGRGWACGLPSWASTTAGQVVLSDVLDKGKDHGLLGRPASFQGGSSWGMPEMGSNPFQGSSNCGEAESPASNQLLQERSNQDAVGSSGSKTNENMINISNEVVTSSKKPHPAQNRRRGIGSNSMEDMPCVFTQGSGPNGRRIEGILYRYGKGQEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSSTPYL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1478 398 Pfam Ethylene-responsive binding factor-associated repression 88 122 IPR012463 -
Dere13g1478 398 Coils Coil 159 186 - -
Dere13g1478 398 Pfam Tify domain binding domain 356 390 IPR032308 -
Dere13g1478 398 MobiDBLite consensus disorder prediction 126 211 - -
Dere13g1478 398 Pfam Putative nuclear localisation signal 143 254 IPR032310 -
Dere13g1478 398 MobiDBLite consensus disorder prediction 248 272 - -
Dere13g1478 398 MobiDBLite consensus disorder prediction 232 272 - -
Dere13g1478 398 MobiDBLite consensus disorder prediction 302 327 - -
Dere13g1478 398 MobiDBLite consensus disorder prediction 151 192 - -
Dere13g1478 398 MobiDBLite consensus disorder prediction 1 30 - -
Dere13g1478 398 PANTHER AFP HOMOLOG 2 64 394 IPR031307 GO:0007165
Dere13g1478 398 MobiDBLite consensus disorder prediction 126 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1478 Dere-ChrDere13 19932047 19937406 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1478 13 19932047 19937406 Dere13g1478 13 19932047 19937406 ECH