Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1462 ATGCAAACCCAGGTAGGATCCAAGATAAATTTGGACTCAACCGGAATTAGCGCTCTTCCCAAATTGGTTTCTGAATCTCACTGCTTAACGACCTCAACTGGGGATCTGATTGACTACTCGTTGGCGATCGGTTCTACCAGAATTGGCACTGCTCAATCGTTTTCTAGTGGATGTTTCCGGACATCTTTGAAAACAGGATTTCCCTTACACGATCTGGACATGAGAAGCTCCTGGTTCAATAAATTGTCCATCATTATTGGCCCTAGGCCTCCAGTGAGCTGGTTAGTCTTGTGCCTGATTAGCCTGCTTGCACTAATTGCAGTCTTAGGTTCATCTTCTTCAAATGTCATTGATTCTGTATCTCACACTCCCGCATCTCTCATTTATACGAACTACAGAAGGATAAAAGAGCAAGCGGCAGTTGATTATTTGGAGTTAAGGTCTGTATCATTGGGTATCAATGGGCAAAGAGAACTTGACCTTTGTGGTAAAGAAAGAGAAAATTTTGTGCCCTGTTACAATGTTTCAGCAAATTTGTTGGCAGGGTTTAAAGAAGGTGAGGAGTTTGATCGGCATTGTGAAGTGTCAAGAGAAGCTGAGAGGTGCTTAGTTCGCCCTCCTAAGGACTATAAGATTCCCCTGAGATGGCCAACTGGCAGGGATGTAATATGGAGTGGAAATGTGAAGCTAACCAAAGACCAATTTCTTTCGTCTGGAAGTATGACCAAAAGGTTAATGCTACTAGAAGAGAATCAAATTGCATTTCACTCAGAAGATGGATTGATCTTTGATGGTATGAAAGATTACTCTCGCCAACTTGCAGAGATGATAGGGTTAGGAAGTGACGCTGAATTTTCTCAAGCTGGTGTACACATTATACTAGATATCAATTGTGGATTTGGTAGCTTTGGAGCTCATTTGGCATCTCTGAAACTAATGGCAGTGTGTATTGCGGCATATGAAGCAACTGGCAGCCAGGTTCAATTGGCCCTTGAGAGAGGCCTTCCTGCAATGATTGGCAATTTTATTACAAGGCAGCTTCCTTATTCATCATTATCATATGACATGGTTCACTGTGCTCAGTGTGGCATCATTTGGGAGGACAAAGATGGAATGTTCCTTATTGAAGTTGATCGTGTTCTTAAACCTGGAGGATACTTTGTTCTAACCTTACCCTCAAGCAGTCCACAGGGAAGTTCATCACAGGTGAAAAAAAACTCTATCTTGACCCCATTGGAAGAGCTACACCAAAAGCTCTGCTGGACTCTTCTAGCTCAGCAAGATGAGACTTTTATCTGGCAGAAGACTGCAGATATCAATTGCTATGCATCTCGCAAGCAGCATGGTATACCTCTATGTAAAGAAAGGGATGACAGTCAGTCATATTATCAGCCTCTTGTACCATGTATAAGAGTTCAGCCTGAAGATTTCTATGAAGATATGCAATTGTGGAGAACAGCTCTTAAGAATTATTGGTCTTTGCTATCTCCATTAATTTTCTCTGACCATCCAAAGAGACCTGGAGATGAAGACCCGCTGCCTCCATTTAACATGATACGCAATGTGATGGACATGAGTGCTAATTATGCAGGTCTTAATGCTGCCCTTCTGGAGGAAAGAAAATCAGTGTGGGTTATGAATGTGGTTCCTGCCAGTGCTTCTAATAGACTTCCTCTTATACTAGACAGAGGTTTTGCTGGTGTTATTCATGATTGGTGCGAACCTTTCCCCACATACCCCCGGACATATGACTTGCTTCATGCTTATGGACTTCTTTCACATCTCGCTTCAGAGAGGTGCAGCATTATTGACTTATTCTTGGAGATGGATAGAATACTTCGTCCAGAGGGATGGGTAATTCTTTCCGATAAAATGGGAGCTATTGAGATGGCGCGAAGATTTGCAACACAAGTACGTTGGGAAGCAAGGGTAATTGACCTTCAAAATGGCAGTGACCAGCGGCTACTTGTTTGCCAAAAACCATTTATCAAAAGATAA 1998 0.4239 MQTQVGSKINLDSTGISALPKLVSESHCLTTSTGDLIDYSLAIGSTRIGTAQSFSSGCFRTSLKTGFPLHDLDMRSSWFNKLSIIIGPRPPVSWLVLCLISLLALIAVLGSSSSNVIDSVSHTPASLIYTNYRRIKEQAAVDYLELRSVSLGINGQRELDLCGKERENFVPCYNVSANLLAGFKEGEEFDRHCEVSREAERCLVRPPKDYKIPLRWPTGRDVIWSGNVKLTKDQFLSSGSMTKRLMLLEENQIAFHSEDGLIFDGMKDYSRQLAEMIGLGSDAEFSQAGVHIILDINCGFGSFGAHLASLKLMAVCIAAYEATGSQVQLALERGLPAMIGNFITRQLPYSSLSYDMVHCAQCGIIWEDKDGMFLIEVDRVLKPGGYFVLTLPSSSPQGSSSQVKKNSILTPLEELHQKLCWTLLAQQDETFIWQKTADINCYASRKQHGIPLCKERDDSQSYYQPLVPCIRVQPEDFYEDMQLWRTALKNYWSLLSPLIFSDHPKRPGDEDPLPPFNMIRNVMDMSANYAGLNAALLEERKSVWVMNVVPASASNRLPLILDRGFAGVIHDWCEPFPTYPRTYDLLHAYGLLSHLASERCSIIDLFLEMDRILRPEGWVILSDKMGAIEMARRFATQVRWEARVIDLQNGSDQRLLVCQKPFIKR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1462 665 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 153 475 IPR004159 GO:0008168
Dere13g1462 665 Gene3D Vaccinia Virus protein VP39 267 431 IPR029063 -
Dere13g1462 665 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 202 405 IPR029063 -
Dere13g1462 665 FunFam probable pectin methyltransferase QUA2 251 436 - -
Dere13g1462 665 CDD AdoMet_MTases 293 391 - -
Dere13g1462 665 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 168 483 IPR004159 GO:0008168
Dere13g1462 665 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 484 651 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1462 Dere-ChrDere13 19779032 19784479 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1462 13 19779032 19784479 Dere13g1462 13 19779032 19784479 ECH