Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1239 ATGGCCGGAAGAGGAGCTGCGCCACCGCCGAAGCAAGACGAGCTTCAGCCACATCCGGTGAAAGATCAGCTACCCAATGTTTCTTACTGCATTACAAGTCCTCCTCCTTGGCCGGAGGCGATTCTACTGGGGTTCCAGCATTACCTGGTGATGCTTGGCACAACTGTTCTGATACCTTCTTCTCTAGTTCCTCAGATGGGAGGAGGCAATGAAGAGAAAGCAAAAGTGATTCAGACTCTACTATTTGTGGCTGGCATAAACACATTTTTCCAATCATTATTTGGGACCCGTCTACCTGCTGTTATTGGAGGCTCCTACACCTTTGTCCCCACTACTATTTCAATCATTTTGGCTGGTCGCTACAGTGACATTGTGAATCCTCAGGAGAAATTTGAGAGGATAATGCGAGGAACACAGGGTGCTCTTATTGTGGCTTCAACCCTCCAAATCGTTCTTGGCTTCAGTGGTCTTTGGCGTAATATAGTGAGGTTCTTGAGTCCTCTGTCTGCTGTTCCCTTGGTTGCTCTATCAGGCTTTGGCCTTTATGAGTTGGGTTTTCCTGTGCTTGCAAAATGTGTGGAGATTGGGCTGCCAGAACTCGTAATCCTTCTAATATTTTCACAGTACATTCCTCATATGATGAAAGGAGACAGACCTATATTTGATCGCTTTGCTGTTATATTCTCAGTGGCCATTGTTTGGATATATGCTCATCTCCTCACAGTGGGTGGAGCCTATAGAAATGCAGCACCTAAAACTCAAATGACTTGCAGAACTGATCGTGCTGGAATTATTGGTGGTGCTCCTTGGATTAGAATCCCATATCCTTTTCAATGGGGAGCTCCTACATTTGATGCTGGAGAAGCTTTTGCTATGATGGCTGCTTCATTTGTTGCTTTAGTAGAGTCCACTGGTGCTTTTATTGCTGTGTCAAGGTATGCAAGTGCAACTCCAATGCCACCTTCAGTTCTTAGCCGTGGTGTTGGTTGGCAGGGAGTAGGGATTTTGTTATCCGGGATCTTTGGGACTGGGAATGGATCATCAGTTTCTGTAGAGAATGCTGGACTTTTGGCTCTGACACGCGTGGGTAGCCGAAGGGTTGTTCAAATAGCAGCTGCATTCATGATCTTCTTCTCAATACTTGGAAAATTCGGAGCTGTCTTTGCCTCAATCCCAGCACCAATAGTTGCAGCTTTGTATTGTCTTTTCTTTGCCTATGTGGGTTCTGCAGGGCTCAGTTTCCTTCAGTTCTGCAATTTAAACAGCTTCCGAACTAAATTTATCTTGGGTTTTTCTGTCTTCATGGGCTTGTCTGTTCCACAATACTTCAATGAGTACACAGCATTCAAGGGTTATGGTCCTGTCCACACTAGAGCTAGATGGTTCAACGATATGATCAATGTGCCATTATCATCAGAAGCATTTGTGGCTGGTTTACTGGCACTGTTCTTGGACGTGACATTGCACAAGAAAGACAATCAAACCCGGAAAGACAGAGGGATGCACTGGTGGGACAGATTCAGATCATTCAAGACAGATACGAGGAGTGAGGAGTTCTATTCTCTTCCCTTCAATCTCAACAAGTTTTTCCCATCTGTTTGA 1602 0.4513 MAGRGAAPPPKQDELQPHPVKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPSSLVPQMGGGNEEKAKVIQTLLFVAGINTFFQSLFGTRLPAVIGGSYTFVPTTISIILAGRYSDIVNPQEKFERIMRGTQGALIVASTLQIVLGFSGLWRNIVRFLSPLSAVPLVALSGFGLYELGFPVLAKCVEIGLPELVILLIFSQYIPHMMKGDRPIFDRFAVIFSVAIVWIYAHLLTVGGAYRNAAPKTQMTCRTDRAGIIGGAPWIRIPYPFQWGAPTFDAGEAFAMMAASFVALVESTGAFIAVSRYASATPMPPSVLSRGVGWQGVGILLSGIFGTGNGSSVSVENAGLLALTRVGSRRVVQIAAAFMIFFSILGKFGAVFASIPAPIVAALYCLFFAYVGSAGLSFLQFCNLNSFRTKFILGFSVFMGLSVPQYFNEYTAFKGYGPVHTRARWFNDMINVPLSSEAFVAGLLALFLDVTLHKKDNQTRKDRGMHWWDRFRSFKTDTRSEEFYSLPFNLNKFFPSV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1239 533 MobiDBLite consensus disorder prediction 1 20 - -
Dere13g1239 533 NCBIfam purine/pyrimidine permease 41 439 - -
Dere13g1239 533 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 8 531 - -
Dere13g1239 533 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1239 Dere-ChrDere13 17146925 17150480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1239 7 533 Organic Solute Cotransporters AT1G60030 81.784 0.0 913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1239 13 17146925 17150480 Dere13g1239 13 17146925 17150480 ECH