Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1207 ATGGAATTGTGTCTTCTTCTGCGGCGGCTCGGAGGAGCAATTCAATGCATGGAGCACAACGACGCCCGCAAGGTTCCACTTCAACTCGACTGGAATAAACTGTTGCCCTCCCGAGACGACGAGCCGCCACCCATGCTGATCGTGAAGCCTTCTACCGATTCTCTCTCTCAATCCCGAAAATCCTCTGACTTGGGCTTCGATCAGTCATTTCCGCCCGCCGATGATCTAGAACGGTTAAGTGATCGCGATCTTAGAGAGGGACTCCAGAAGAAAAAACGCACCCTGGAGACCATTGGTCCCAAATTGTCTGACAAAGGTGAAAAAATTCGGGCCCTTATCAAGCGCTATGAAGAGGAGATGGCTCGCAGGAAAAGGAGACATCTTTGCGAGAGCATGGGGAATAGAGGTAGAAATGCAATCAAAGTCATGGGTATCCTGTGTTATGCTATATTGGTGTTTTGGAATTCTGACATGGTGATAATTTGGCTGCATAGTGATATTTTGCTCAACAGAGCTATAATTGGAACTGATTGGTTTGTAGTTGGGTTAGCCACTTTGTCTTTTACTTGTAGTCCAAGCAGCTGTGAAGTTGATGAGATTGAGAAGCCAATACCAGCTACAAGCTCATTTACTGTCGAAAGCACAGAAATTGATGGGATGAAAGTCAATATTGGTGCCAATAGGGAACCTGATGATTTGAAATCTTCTGGAAAGTGGGGAAAAGGTGTGTCTAATGGCTTGAAGCAAGAGAATACATCATCTCAAGTACAGGCACCATCCTCATTTGCATCTTCTTTTTATAATAAAATGGATGATACCAATTGTCGGGTGACTAATGCATTTGGTAAAGAGTTATCACTTTTCAAGCATTGTGACAACCATAAAATGAGACACAATGGTGATGTTTCACAGAAGGAAAGAAAGAGAGATCAATCATCTTTAAGACAATTGCCATTTCAATGCCCAAGCAACATTTCCAGATGTGAAACTCCTATTGATGATAAACATTGCAGCTCAGCTTCCGCATTGTCGCTGCAGAGCATTGGGAAAAGACCATCTAGCGGCTTTCCAAAATTGACGGATGCTTTTCAGCCAATTCAATCTGATGGCTCAAGGTCCAGGAAGGGTCAGCCCATTGTTCTTGATGATGAGGATGAGCTTTATATTTTGGAGAAAAATGATCAAGAAGACAAACTTGCTGAATGTGATGATCCAGAATCTGTTGAAATTTGTTACACAGATATAGATTGCCTTGCCCCTGGAGGCTATCTAACATCAACTATAATGAACTTTTACATACGATACCTACAGCAGCAAGCATCTCTGACAAACAGATCAGTAACTGACTATCTTTTTTTCAATACATATTTTTACCAGAAGCTTAAAGATGCTGTTTCCTACAAGCAAAGTGACAGAGAGACGTTCTTTGTGAAGTTCAGAAGGTGGTGGAAGGGTGTAATTATTTTTCAGAAGGCATACGTTCTAATTCCAATACATGAGGATCTTCATTGGAGCTTGATCATTGTATGTATCCCTGACAAGGAAGATGAATCGGGGCCAATCATGCTACATTTGGATTCTTTGGGTCTTCACTCTAGTGGATCAATTTTTGATAATGTAAGAAGATATTTGGTAGAAGAATGGAGATATTTGGTCCGAGAATGTGTGTATTCAGACATTCCTATTGCAGATAGAATATGGAATAATCTTTATAGTAAAATTGAAGATAGAATCATCACGGTTCCTCAACAGAAGAACGACTATGATTGTGGTCTTTTTGTACTGTACTTCATTAAGCGTTTCATTGAAGAGGCTCCTAAAAGATTGAAGAAGAAAGATTTAGCCATGTTCGGGAAGCAGTGGTTTAAACCTGAGGAGGCATCCAATTTGAGAGTAAGAATTCGTACTTTGCTTAAAGTCGAATTTCATAAATCTCGGAAGCAAAACACCATCTCAACAGAATGTGTCGAGACCATCCCTCATTCTTAA 1989 0.4093 MELCLLLRRLGGAIQCMEHNDARKVPLQLDWNKLLPSRDDEPPPMLIVKPSTDSLSQSRKSSDLGFDQSFPPADDLERLSDRDLREGLQKKKRTLETIGPKLSDKGEKIRALIKRYEEEMARRKRRHLCESMGNRGRNAIKVMGILCYAILVFWNSDMVIIWLHSDILLNRAIIGTDWFVVGLATLSFTCSPSSCEVDEIEKPIPATSSFTVESTEIDGMKVNIGANREPDDLKSSGKWGKGVSNGLKQENTSSQVQAPSSFASSFYNKMDDTNCRVTNAFGKELSLFKHCDNHKMRHNGDVSQKERKRDQSSLRQLPFQCPSNISRCETPIDDKHCSSASALSLQSIGKRPSSGFPKLTDAFQPIQSDGSRSRKGQPIVLDDEDELYILEKNDQEDKLAECDDPESVEICYTDIDCLAPGGYLTSTIMNFYIRYLQQQASLTNRSVTDYLFFNTYFYQKLKDAVSYKQSDRETFFVKFRRWWKGVIIFQKAYVLIPIHEDLHWSLIIVCIPDKEDESGPIMLHLDSLGLHSSGSIFDNVRRYLVEEWRYLVRECVYSDIPIADRIWNNLYSKIEDRIITVPQQKNDYDCGLFVLYFIKRFIEEAPKRLKKKDLAMFGKQWFKPEEASNLRVRIRTLLKVEFHKSRKQNTISTECVETIPHS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1207 662 ProSiteProfiles Ubiquitin-like protease family profile. 408 601 IPR003653 GO:0006508|GO:0008234
Dere13g1207 662 Gene3D - 403 638 - -
Dere13g1207 662 Gene3D - 450 578 - -
Dere13g1207 662 MobiDBLite consensus disorder prediction 294 313 - -
Dere13g1207 662 SUPERFAMILY Cysteine proteinases 382 638 IPR038765 -
Dere13g1207 662 MobiDBLite consensus disorder prediction 360 374 - -
Dere13g1207 662 MobiDBLite consensus disorder prediction 40 75 - -
Dere13g1207 662 MobiDBLite consensus disorder prediction 294 316 - -
Dere13g1207 662 MobiDBLite consensus disorder prediction 231 254 - -
Dere13g1207 662 MobiDBLite consensus disorder prediction 352 377 - -
Dere13g1207 662 MobiDBLite consensus disorder prediction 50 65 - -
Dere13g1207 662 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 26 652 - -
Dere13g1207 662 Pfam Ulp1 protease family, C-terminal catalytic domain 423 626 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1207 Dere-ChrDere13 16766929 16788536 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1207 13 16766929 16788536 Dere13g1207 13 16766929 16788536 ECH