Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1116 ATGAAGTTTATGAAACTAGGATCTCGTCCAGATACCTTCTACACTTCAGAGGCAGTAAGGTCAGTCTCTTCTGAAGTTTCCAGCGACCTCTTAATTCAAGTGAAAGGAAGTAGATATCTTCTTCATAAGTTTCCGTTGCTGTCCAAATGCCTACGCCTACAAAAGCTATGTTCAGAATCGCCTGATTCTTCTCCACACCAGATAGTCCAACTCGTTGATTTTCCTAGTGGAGTGGATGCATTTGAACTGTGTGCTAAGTTCTGCTATGGTATTACTGTCACTCTTAGTGCTCACAACATTGTAGCTGCTCGATGTGCTGCTGAATACTTACAGATGACAGAGGATGTGGAGAAGGGGAACCTAATATATAAGCTTGAAATTTTTCTCAACTCTTGCATTCTTCATGGTTGGAAGGATTCTATTGTGACTCTACAGAGCACCAAAGCATTGCCTTTGTGGTCAGAGGATTTAGCAATCACAAGTAGGTGCACTGAAGCAATTGCCTCTAAGGTCTTAAGTCACCCCTCAAAGGTGAGTTTGTCACATAGTCATTCCAGAAGGATCAGAGATGATATATCTTGCAATGGAACCGAAAGTCAGAGGCATAAATCAGTAAGTAAGGGATGGTGGGCTGAAGATTTAGCAGAATTGAGCATAGACCTCTATTGGAGGACCTTGATAGCTATAAAATCTGGTGGCAAGATACCCTCAAATATCATAGGAGATGCATTGAAAGTTTATGCTTCTCGTTGGCTTCCCAATATTTCAAGAAAAGCACAGTCCAATAAGAAAGCAGCAGCATGTGACTCTGATTCAGACTCTGCAAGTGAAATAACTTCAAAGCATCGTATGCTTTTGGAATCAATAGTAAGCTTGCTTCCAGCAGAGAAAGGTGCTGTTTCCTGTAGTTTCCTTCTTAAGCTCTTGAAAGCAGCCAATATTCTCAGTACTTCTTCCTCCTCAAAAATGGAGTTAGCTAAAAGGGTAGGACTTCAGTTGGAGGAAGCCACAGTGAATGATATTTTAATACCCTCATTGTCTTACACCAATGATATGTTGTATGATGTTGATTTGGTAGAGACCATATTGGAACAATTTATGTCACAAGGTCAGAGTCCCCCAACCAGCCCGCCGAGATCCAGTAGGTTAGCAGTTGAAAGAAGGAGGTCACGTTCAGCTGAGAATATTGATTTTGAACTTCAGGAAAGTCGGAGGTCTTCTTCAGCATCTCATAGCTCAAAACTGAAGGTGGCAAAGCTTGTGGATAGGTATCTTCAAGAGGTTTCCAAGGATGTGAATTTGCCCATGTCAAAATTCATTTCTCTTGCTGAAACTATCCCAGCTTTTGCAAGACAGGATCATGATGATCTCTACAAAGCCATTGACATTTTTCTCAAGGCTCATCCAGAGCTCAACAAGAGTGAAAGGAAAAGACTATGTAGAATCCTTAACTGCAAAAAGCTGTCTATGGAAGCTTGCATGCATGCAGCCCAGAATGAGCTACTCCCTCTAAGAGTTGTAGTCCAAGTACTCTTCTTTGAGCAAGCCAGAGCTGCAGCAGCTGGTGGCAAAGTGACTGACTTGCCAAGCAACCTCAAGGCACTACTTATTACACATGGCATTGACCCATTAAAACACACTGCTCCATTAAGCACAACTTCAAGCTTGCATGCAGATGATCAATGGAGTGTTTCTGGCTTCAAGTCACCAAGGTCCAGGACTTCAACTCTCAGGATGAAGCTTGCTGAGGATGATGGTTTAGATGAAAATGATGTTCCTCGTAATGGAATTGGCAGAAATTCTAAACTCAAGGCTTTTTGTGCTCTACCTACTCAACCTAAAAGAATGCTAAGCAAGCTGTGGTCCACCAGTAGAGGCGCCAGCGAAAAGAATTGA 1896 0.4225 MKFMKLGSRPDTFYTSEAVRSVSSEVSSDLLIQVKGSRYLLHKFPLLSKCLRLQKLCSESPDSSPHQIVQLVDFPSGVDAFELCAKFCYGITVTLSAHNIVAARCAAEYLQMTEDVEKGNLIYKLEIFLNSCILHGWKDSIVTLQSTKALPLWSEDLAITSRCTEAIASKVLSHPSKVSLSHSHSRRIRDDISCNGTESQRHKSVSKGWWAEDLAELSIDLYWRTLIAIKSGGKIPSNIIGDALKVYASRWLPNISRKAQSNKKAAACDSDSDSASEITSKHRMLLESIVSLLPAEKGAVSCSFLLKLLKAANILSTSSSSKMELAKRVGLQLEEATVNDILIPSLSYTNDMLYDVDLVETILEQFMSQGQSPPTSPPRSSRLAVERRRSRSAENIDFELQESRRSSSASHSSKLKVAKLVDRYLQEVSKDVNLPMSKFISLAETIPAFARQDHDDLYKAIDIFLKAHPELNKSERKRLCRILNCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAAAGGKVTDLPSNLKALLITHGIDPLKHTAPLSTTSSLHADDQWSVSGFKSPRSRTSTLRMKLAEDDGLDENDVPRNGIGRNSKLKAFCALPTQPKRMLSKLWSTSRGASEKN 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1116 631 ProSiteProfiles NPH3 domain profile. 208 517 IPR027356 -
Dere13g1116 631 SUPERFAMILY POZ domain 20 115 IPR011333 -
Dere13g1116 631 PANTHER OS12G0117600 PROTEIN 23 563 IPR043454 -
Dere13g1116 631 MobiDBLite consensus disorder prediction 367 388 - -
Dere13g1116 631 Pfam NPH3 family 209 493 IPR027356 -
Dere13g1116 631 Gene3D Potassium Channel Kv1.1; Chain A 14 120 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1116 Dere-ChrDere13 15449957 15452675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1116 26 523 EF-hand Containing Proteins AT3G44820 36.276 2.83e-94 302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1116 13 15449957 15452675 Dere13g1116 13 15449957 15452675 ECH