Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0810 ATGCGACTTTGGGAATTGTCGGATCAGTATATCATTGAGCCCACCGATGGATCTTCTGATTCTTCTTTGTCAGTGAGTCGAGTGGATGGCTCGATGAAGCTTATTGATGCGATTCCGGAATGCAACAAGCTTCGAGTTCCTAAGATTTGGAAAATTTTCGGTGTGGTTGGGATGATAAGGCTTTTGGCTGGATCATATTTGCTGGTTATAACTGAGCGTGAATGTGTCGGATCTTACTTGGGGCATCCAATTTACAAAATTTCATCCATGAAGATTTTTCCATGTGATCATTCTCTTAATAATACATCTGCTGAACAGAAGACAGAGGTGGAGTTTTCCAAGCTGCTAAATATTGCAGAGAAGACGTCTGGTCTGTTTATCTCATACGACACCAATTTAACACTGAGTGCCCAGCGATTGAATGACCTAGGTGATGAATCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCACGGTTTCTGTGGAACAATTATATGTTGGAAGGGCTCATTGATAACAAGTTAGATCCATTCTTACTCCCTGTGGTTCAAGGCAGTTTTCATCACTTTCAATCAGCCATTGGGAAGGATATTGTTGATGTCACTTTGATTGCTAGGAGATGCACGAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGACCCTGATGGCTATGTCGCTAATTTTGTGGAAACTGAACAAATTATGCAGTTCAATGGGTATACAGCATCATTTGTTCAGGTCCGGGGTTCAATCCCATTGCTCTGGGATCAAATTGTTGACCTGACATATAAACCTAAGTTTGAGTTAGTGAAACTTGAGGAGGCTCCTCGAGTCATGGAGCGGCACTTCCTAGATTTAAGGAAAAGATATGGGGCTGTCTTAGCTATTGATCTTGTCAACAAGCATGGAGGAGAGGGGCGGCTGTGTGAAAAATTTGGTAGTACAATGCAGCATGTGTCTAGTGATGATGTAAGATATCTGCACTTTGATTTTCATCATATATGTGGGCACGTTCATTTCGAACGCCTCTCTGTCCTTTATGACCAAATTTCAGATTTTCTCGAGAGAAATGGATATCTTCTATTGAATGAAAAGGGGGAGAAAATGAAGGAGCAGCTTGGAGTTGTCCGGACCAATTGTATTGATTGTCTAGACCGTACAAATGTAACTCAGAGCATGATAGGCCGAAATATGTTGGAATTCCAACTTAGAAGGCTTGGTGTATTTGCTGCTGAAGAAGCCATTAGTTCACATCCAAATCTGGATGAAAACTTTAAGATCATGTGGGCTGATCATGGGGATGATGTAAGCATCCAATATTCAGGCACGCCTGCTCTTAAAGGAGACTTTGTCAGATATGGGCACCGCACGATGCAAGGAATACTAAAAGATGGCTGGAATGCTCTTCTACGCTATTATTTGAATAATTTTTGTGATGGAACAAAGCAGGATGCAATTGATCTCCTGCAAGGACATTACATAGTTTCTGTCAGCAGAGATATGGCTCCCTCTTCTCAAAAAGGAGGAATTGAAGCTATAGCTTCCTTTCCTCTGGCTTTTTCTCTGGTTATGATTGGATTCGTTTTTGCAACCATGTCATTGAGACAAGTTCGGTACGATTTTCGGCACTTCTTCTTTTCCCTAATGTGGGCAAGCATTAGTGTGGCTATAGCAGCATTCGTGCGGGCCAACGGTCGGGTTTTCTGCAACAGACCTCGCCTGCACAAGCCACGGCGTTGA 1746 0.4278 MRLWELSDQYIIEPTDGSSDSSLSVSRVDGSMKLIDAIPECNKLRVPKIWKIFGVVGMIRLLAGSYLLVITERECVGSYLGHPIYKISSMKIFPCDHSLNNTSAEQKTEVEFSKLLNIAEKTSGLFISYDTNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEGLIDNKLDPFLLPVVQGSFHHFQSAIGKDIVDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQFNGYTASFVQVRGSIPLLWDQIVDLTYKPKFELVKLEEAPRVMERHFLDLRKRYGAVLAIDLVNKHGGEGRLCEKFGSTMQHVSSDDVRYLHFDFHHICGHVHFERLSVLYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEFQLRRLGVFAAEEAISSHPNLDENFKIMWADHGDDVSIQYSGTPALKGDFVRYGHRTMQGILKDGWNALLRYYLNNFCDGTKQDAIDLLQGHYIVSVSRDMAPSSQKGGIEAIASFPLAFSLVMIGFVFATMSLRQVRYDFRHFFFSLMWASISVAIAAFVRANGRVFCNRPRLHKPRR 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0810 581 ProSiteProfiles Sac phosphatase domain profile. 116 444 IPR002013 GO:0016791
Dere13g0810 581 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 1 578 - -
Dere13g0810 581 Pfam SacI homology domain 53 337 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0810 Dere-ChrDere13 10018603 10030938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0810 1 580 Acyl Lipid Metabolism Gene Families AT5G66020 75.086 0.0 966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1176 09 15511416 15521488 Dere13g0810 13 10018603 10030938 CCT
Dere13g0810 13 10018603 10030938 Dere13g0810 13 10018603 10030938 ECH