Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0800 ATGACTAATATGCAATTCAAAATTGAATCCCACAACGACGGCAAAAATAATTCTTTCAAGTCATCTCCCAGTGCTCTTCTTCACCATCATATTGCCAACCACGGTGGCTTCGGTTCTCCACCGGCTCGGTCCTGTCTGACTGGCTCACGAGTTAAGCCGGAGCAACATGATGGTGCCCGCGCACAATGCAACAATGGGAAGAGAATTGGAGGCTCTCGGAAGCGAGTCACGGTGAACGAGTCGGGGGATGACTCGGTGGTCCGTAATTGGGTCAATACCGGCGGGAGACCTCTCGGTCTTGCTTGGGGTTGGAACGGTGAAGTTATAGTAGCTGACTCCGACAAGGGGTTGTTAAGAGTAACAAGGGAGGGGAAGGTAGAGGTGCTGGCGAATGAAGTCGAGGGCTTAAGATTCAAGTTAACAGATGGAGTGGATGTAGCAGAAGATGGCACCATTTATTTCACAGACGCTTCATACAAATACAGCCTGAAGGATTTCATCTTTGACGTTTTGGAAGGGAAGCCTCATGGCAGACTCATCAGCTATCATCCATCAACCAACCACACAAAGCTTCTGGCCTCCAATCTCTTCTTTCCCAATGGAGTTGCAGTCTCACCAGATCAACAGTTTGTGGTCTTCTGTGAAACTGTTCTGAGGAGGTGCAGAAAATATTACATACAGGGCCCTAAGAAAGGAAGCATAGAAAAATTTATTGATGATCTACCTGGCTTACCTGATAACATTCATTATGATAGTTGCCATTATTGGATTGGAATGGCCAAGGCGTATTATTGGGACTTAGCGATGAGACATGATTCCTTTGGGAAGGCCATGGAAATGATTGCGAAGCATGGAAGGAGACCACATATGGGGAAGAATGGAGGAGTAGTGTCTGTGGATTTGGACGGAAAATTAAGTGCATACTATTATGATCTTGAGTTGTCGATAGTCACAAGTGGGAGAAAGATAGGGAATCATATATATTGTGGCTCACTTCTCTATCCCTTTATCATTCGTCTTGATTTGAATCACTATCCTTTCCTACTTAACACAACCTCAAGAAAAGAACATATCAACGGTGAGCTACACAATAATACAATGTACTAA 1107 0.4481 MTNMQFKIESHNDGKNNSFKSSPSALLHHHIANHGGFGSPPARSCLTGSRVKPEQHDGARAQCNNGKRIGGSRKRVTVNESGDDSVVRNWVNTGGRPLGLAWGWNGEVIVADSDKGLLRVTREGKVEVLANEVEGLRFKLTDGVDVAEDGTIYFTDASYKYSLKDFIFDVLEGKPHGRLISYHPSTNHTKLLASNLFFPNGVAVSPDQQFVVFCETVLRRCRKYYIQGPKKGSIEKFIDDLPGLPDNIHYDSCHYWIGMAKAYYWDLAMRHDSFGKAMEMIAKHGRRPHMGKNGGVVSVDLDGKLSAYYYDLELSIVTSGRKIGNHIYCGSLLYPFIIRLDLNHYPFLLNTTSRKEHINGELHNNTMY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0800 368 Pfam Strictosidine synthase 142 229 IPR018119 GO:0009058|GO:0016844
Dere13g0800 368 SUPERFAMILY Calcium-dependent phosphotriesterase 83 344 - -
Dere13g0800 368 MobiDBLite consensus disorder prediction 1 57 - -
Dere13g0800 368 Gene3D - 62 294 IPR011042 -
Dere13g0800 368 PANTHER STRICTOSIDINE SYNTHASE-RELATED 88 333 - -
Dere13g0800 368 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0800 Dere-ChrDere13 9913771 9917079 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0800 13 9913771 9917079 Dere13g0800 13 9913771 9917079 ECH