Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0635 ATGGCCCAAACCATTGGGAAGTGCTTTTTCTTGACTTCTGTTTTATTCAACTGTGTGGCGAATCTTAGATTCCTAGTTGTCTTTCAAGGAAAAGGCAAGATGATAAGAGCGGTATTGGTGATGAACACGCAGGGGAAGCCCCGTCTCGCAAAATTTTATGAATTTCGGCCCGTGGAGAAGCAGCAGGAACTAATACGCAATGTCTTTTCGGTTTTATGCAGTAGAGCTGAAAATGTAAGCAATTTCGTGGATGCTGAGTCCATCTTTGGTCAGGATGCTCGCCTTGTCTACAAGCACTACGCAACTTTATACTTCGTGTTTATATTTGATAGTTCTGAAAATGAGCTGGCTATGCTTGACTTAATACAAGTCTTCGTTGAAACACTGGACAAATGCTTCCGAAATGTATGCGAGCTTGACGTGGTGTACAATTATACCAAGATGCATACAATTCTAGATGAGATTATCTTTGGAGGGCAGGTGTTAGAAACAAGTTCAACCGAGGTTATGAAGGCTATTGAAGAAATATCAAAGTGCTCTCTCTCTCTCTCCTCCTATTTGGCTTTCTAG 570 0.4158 MAQTIGKCFFLTSVLFNCVANLRFLVVFQGKGKMIRAVLVMNTQGKPRLAKFYEFRPVEKQQELIRNVFSVLCSRAENVSNFVDAESIFGQDARLVYKHYATLYFVFIFDSSENELAMLDLIQVFVETLDKCFRNVCELDVVYNYTKMHTILDEIIFGGQVLETSSTEVMKAIEEISKCSLSLSSYLAF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0635 189 ProSitePatterns Clathrin adaptor complexes small chain signature. 95 105 IPR000804 GO:0006886|GO:0016192|GO:0030117
Dere13g0635 189 CDD AP3_sigma 34 178 IPR027155 GO:0006896|GO:0030123
Dere13g0635 189 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 35 178 IPR016635 GO:0015031
Dere13g0635 189 FunFam AP complex subunit sigma 34 186 - -
Dere13g0635 189 SUPERFAMILY SNARE-like 34 176 IPR011012 -
Dere13g0635 189 Pfam Clathrin adaptor complex small chain 34 177 IPR022775 -
Dere13g0635 189 Gene3D - 34 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0635 Dere-ChrDere13 7962339 7965348 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0635 13 7962339 7965348 Dere13g0635 13 7962339 7965348 ECH